RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 EPS8Q12929 822 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 BNIP2Q12982 314 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 SF1Q15637 639 aaKnown RBP11.23□□□□□ -0.61
USP6NL-201ENST00000277575 TTC23Q5W5X9 447 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 TRIM40Q6P9F5 258 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 LPCAT2Q7L5N7 544 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 OSBPL2Q9H1P3 480 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 C11orf49Q9H6J7 331 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 IPPKQ9H8X2 491 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 EGFL7Q9UHF1 273 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 PRPF19Q9UMS4 504 aaKnown RBP11.23□□□□□ -0.61
USP6NL-201ENST00000277575 ANGPT4Q9Y264 503 aa11.23□□□□□ -0.61
USP6NL-201ENST00000277575 LINC00854A0A1B0GVQ3 168 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 UBXN8O00124 270 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ESR1P03372 595 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 MLLT6P55198 1093 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 KIAA0930Q6ICG6 404 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 DHDDSQ86SQ9 333 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ZNF605Q86T29 641 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 PARGQ86W56 976 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ULK2Q8IYT8 1036 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 DDHD1Q8NEL9 900 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 LRRC15Q8TF66 581 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 PPCDCQ96CD2 204 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ITCHQ96J02 903 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 C7orf26Q96N11 449 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 GAS2L1Q99501 681 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 SPATA5L1Q9BVQ7 753 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ZNF490Q9ULM2 529 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 A0A0J9YYE9 177 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 HCRTO43612 131 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 PTGER3P43115 390 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 HSPA7P48741 367 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 NRLP54845 237 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 FPGSQ05932 587 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 TNK2Q07912 1038 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 PPIDQ08752 370 aaKnown RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 PLA2G4EQ3MJ16 856 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CFAP206Q8IYR0 622 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CLHC1Q8NHS4 586 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 AGAP2Q99490 1192 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 AIF1LQ9BQI0 150 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CCSER2Q9H7U1 834 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 COPG1Q9Y678 874 aaKnown RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CCL5P13501 91 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CYP4F2P78329 520 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ACAP2Q15057 778 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 LSM12Q3MHD2 195 aaKnown RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 KLHL35Q6PF15 583 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 OLFML1Q6UWY5 402 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ARHGAP36Q6ZRI8 547 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 EPHX4Q8IUS5 362 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CPNE9Q8IYJ1 553 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 KIAA2013Q8IYS2 634 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 C2orf73Q8N5S3 287 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-201ENST00000277575 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 MTERF3Q96E29 417 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 VPS4AQ9UN37 437 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 CORO2BQ9UQ03 480 aa11.22□□□□□ -0.61
USP6NL-201ENST00000277575 A0A087WXM4 84 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 DHRS12A0PJE2 317 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 MYL12AP19105 171 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 INCA1Q0VD86 236 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 LCP2Q13094 533 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 GPAT3Q53EU6 434 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 METTL21CQ5VZV1 264 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 CRELD2Q6UXH1 353 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-201ENST00000277575 ISLR2Q6UXK2 745 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 FSTL5Q8N475 847 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-201ENST00000277575 DTNBP1Q96EV8 351 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 NPAS2Q99743 824 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 C16orf70Q9BSU1 422 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 LRTM1Q9HBL6 345 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 MIOSQ9NXC5 875 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 C3orf18Q9UK00 162 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 TRBV23OR9-2A0A075B6M9 112 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 PER2O15055 1255 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 OR6A2O95222 327 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 SLC10A7Q0GE19 358 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 PEX6Q13608 980 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-201ENST00000277575 ANXA8L1Q5VT79 327 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 IRGCQ6NXR0 463 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 PHC3Q8NDX5 983 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 RNFT2Q96EX2 444 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 GPR88Q9GZN0 384 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 NOL11Q9H8H0 719 aaKnown RBP11.21□□□□□ -0.61
USP6NL-201ENST00000277575 GABRQQ9UN88 632 aa11.21□□□□□ -0.61
USP6NL-201ENST00000277575 RGS20O76081 388 aa11.21□□□□□ -0.62
USP6NL-201ENST00000277575 UQCRBP14927 111 aa11.21□□□□□ -0.62
USP6NL-201ENST00000277575 PPIBP23284 216 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms