RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 HOXB8P17481 243 aaPredicted RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 AQP5P55064 265 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 ACTN3Q08043 901 aaPredicted RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 ILF2Q12905 390 aaKnown RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 FAM219BQ5XKK7 198 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SERPINA9Q86WD7 417 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SIDT2Q8NBJ9 832 aaKnown RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 PIWIL2Q8TC59 973 aaKnown RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 LKAAEAR1Q8TD35 194 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 CD200R1Q8TD46 325 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 TMEM237Q96Q45 408 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 KXD1Q9BQD3 176 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 DRC3Q9H069 523 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 HEY2Q9UBP5 337 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 MID2Q9UJV3 735 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 TMPRSS11EQ9UL52 423 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 COL4A2P08572 1712 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 ASLP04424 464 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 TIMP2P16035 220 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SERPINB3P29508 390 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 USP45Q70EL2 814 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SNX20Q7Z614 316 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 CCDC91Q7Z6B0 441 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 TDHQ8IZJ6 230 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 FGF14Q92915 247 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 RPP25Q9BUL9 199 aaKnown RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 POMKQ9H5K3 350 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 GTSE1Q9NYZ3 720 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 IL36AQ9UHA7 158 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SARDHQ9UL12 918 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SPINT1O43278 529 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 T-ENOLP0DO92 83 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 CD9P21926 228 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 ACRV1P26436 265 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 BMP8BP34820 402 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 SPAM1P38567 509 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 PTGER3P43115 390 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 CLCN7P51798 805 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 NAGLUP54802 743 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 NCALDP61601 193 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 PARM1Q6UWI2 310 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 RPS27LQ71UM5 84 aaKnown RBP12.04□□□□□ -0.48
SDE2-201ENST00000272091 ZFP14Q9HCL3 533 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 TICRRQ7Z2Z1 1910 aa12.04□□□□□ -0.48
SDE2-201ENST00000272091 GLYATL1P3A0A0U1RQE8 302 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 H2AFYO75367 372 aaKnown RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 FSBPO95073 299 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 MPSTP25325 297 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 DNAJB13P59910 316 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 RALGDSQ12967 914 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 RCN2Q14257 317 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 GRAMD4Q6IC98 578 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ASB8Q9H765 288 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 HAO1Q9UJM8 370 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 SLC30A1Q9Y6M5 507 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 DCTN3O75935 186 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 HLA-EP13747 358 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 MTHFD2P13995 350 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ATP5F1P24539 256 aaPredicted RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 PRKAA2P54646 552 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 RAD51Q06609 339 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 CLNKQ7Z7G1 428 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 LRRC37BQ96QE4 947 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ATOH8Q96SQ7 321 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 MYO1CO00159 1063 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ARNTLO00327 626 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 GM2AP17900 193 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 LTBRP36941 435 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 LIG3P49916 1009 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 POM121L1PQ3SYA9 428 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ARL13AQ5H913 290 aaPredicted RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 AARS2Q5JTZ9 985 aaKnown RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 VWA5B1Q5TIE3 1220 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 BRAT1Q6PJG6 821 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 MAPK15Q8TD08 544 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 DERL2Q9GZP9 239 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 CYP4F12Q9HCS2 524 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 TNFRSF12AQ9NP84 129 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 TAS2R13Q9NYV9 303 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ATP5BP06576 529 aaKnown RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 RBP1P09455 135 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 RPS3P23396 243 aaKnown RBP eCLIP12.03□□□□□ -0.48
SDE2-201ENST00000272091 GJA4P35212 333 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 B4GALNT1Q00973 533 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 C9orf64Q5T6V5 341 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 HSD11B1LQ7Z5J1 315 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 KCNJ9Q92806 393 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 CDH19Q9H159 772 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 PCDH12Q9NPG4 1184 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 DEC1Q9P2X7 70 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 MBD1Q9UIS9 605 aaPredicted RBP12.03□□□□□ -0.48
SDE2-201ENST00000272091 TRIM33Q9UPN9 1127 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
SDE2-201ENST00000272091 ESR1P03372 595 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 SPINT3P49223 89 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms