RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IDO2Q6ZQW0 420 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ENOSF1Q7L5Y1 443 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CCNYL1Q8N7R7 359 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NIPA2Q8N8Q9 360 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 OR4M2Q8NGB6 313 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 BRI3BPQ8WY22 251 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ZBTB45Q96K62 511 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 C1QTNF7Q9BXJ2 289 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 HAPLN2Q9GZV7 340 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 FAM49AQ9H0Q0 323 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 RNF167Q9H6Y7 350 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SMURF2Q9HAU4 748 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NTN4Q9HB63 628 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NMRAL1Q9HBL8 299 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ZBTB20Q9HC78 741 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 SYTL2Q9HCH5 934 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CHST12Q9NRB3 414 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CMTM6Q9NX76 183 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SYBUQ9NX95 663 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PDZK1P1A8MUH7 402 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ARPC2O15144 300 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 OGTO15294 1046 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NOBOXO60393 691 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ARHGEF15O94989 841 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 TRUB2O95900 331 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 GOT2P00505 430 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 C2P06681 752 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ALOX12P18054 663 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 RFC2P35250 354 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NPTX2P47972 431 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CLCN3P51790 818 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ALDH6A1Q02252 535 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 GALNT1Q10472 559 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 TAF1CQ15572 869 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 TSTD2Q5T7W7 516 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CLEC14AQ86T13 490 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 LACC1Q8IV20 430 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SIMC1Q8NDZ2 872 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CHST13Q8NET6 341 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 GPRC5AQ8NFJ5 357 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SPPL2BQ8TCT7 592 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NRBF2Q96F24 287 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CERS2Q96G23 380 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PSKH2Q96QS6 385 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ZNF300Q96RE9 604 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 AMBRA1Q9C0C7 1298 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 REXO4Q9GZR2 422 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 UPF3AQ9H1J1 476 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 GTSE1Q9NYZ3 720 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SBF1O95248 1867 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 KIAA1217Q5T5P2 1943 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CENPXA8MT69 81 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 GRAP2O75791 330 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 LRIG2O94898 1065 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 CST3P01034 146 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 CD47Q08722 323 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PPIL2Q13356 520 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SKIV2LQ15477 1246 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 UGT3A2Q3SY77 523 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TBRG1Q3YBR2 411 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SOWAHCQ53LP3 525 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 ERAP2Q6P179 960 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 DPH6Q7L8W6 267 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 KCTD20Q7Z5Y7 419 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 CNIH3Q8TBE1 160 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 RMDN1Q96DB5 314 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 C12orf42Q96LP6 360 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ACE2Q9BYF1 805 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 TIGARQ9NQ88 270 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ACOXLQ9NUZ1 547 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 COMMD8Q9NX08 183 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 FBXO40Q9UH90 709 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 USP18Q9UMW8 372 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PTGDR2Q9Y5Y4 395 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 DOCK3Q8IZD9 2030 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 UPK1AO00322 258 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SRP72O76094 671 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 GFAPP14136 432 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 PKLRP30613 574 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 MLLT6P55198 1093 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 TFDP2Q14188 446 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 EMC2Q15006 297 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 DGUOKQ16854 277 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ZACNQ401N2 412 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 WDR44Q5JSH3 913 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TOR2AQ5JU69 321 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SAMD4BQ5PRF9 694 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 NOL9Q5SY16 702 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 C6orf141Q5SZD1 244 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SCARA5Q6ZMJ2 495 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ADAMTSL2Q86TH1 951 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 RIOX2Q8IUF8 465 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 UBQLNLQ8IYU4 475 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PIK3C3Q8NEB9 887 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 LILRB1Q8NHL6 650 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 PNPT1Q8TCS8 783 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms