RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 TMLHEQ9NVH6 421 aa19.75■□□□□ 0.75
CSPG5-201ENST00000264723 RNF186Q9NXI6 227 aa19.75■□□□□ 0.75
CSPG5-201ENST00000264723 EIF3LQ9Y262 564 aaKnown RBP19.75■□□□□ 0.75
CSPG5-201ENST00000264723 RAI2Q9Y5P3 530 aa19.75■□□□□ 0.75
CSPG5-201ENST00000264723 SDHDO14521 159 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 RPL10P27635 214 aaKnown RBP19.74■□□□□ 0.75
CSPG5-201ENST00000264723 UBXN11Q5T124 520 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 ARL15Q9NXU5 204 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 Q9Y3F1 56 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 SEC22BO75396 215 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 SLC44A2Q8IWA5 706 aaPredicted RBP19.74■□□□□ 0.75
CSPG5-201ENST00000264723 ITFG1Q8TB96 612 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 LINGO1Q96FE5 620 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 NMUR1Q9HB89 426 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 PARVBQ9HBI1 364 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 TMEM161AQ9NX61 479 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 FCF1Q9Y324 198 aaKnown RBP19.74■□□□□ 0.75
CSPG5-201ENST00000264723 CCDC162PA2VCL2 907 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 GRID2O43424 1007 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 HS6ST1O60243 411 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 ACRP10323 421 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 ADRM1Q16186 407 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 ATXN7L2Q5T6C5 722 aaPredicted RBP19.74■□□□□ 0.75
CSPG5-201ENST00000264723 PAQR3Q6TCH7 311 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 LRRTM3Q86VH5 581 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 OR56A4Q8NGH8 313 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 OR2T34Q8NGX1 318 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 OR2T3Q8NH03 318 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 C9orf16Q9BUW7 83 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 CFAP97Q9P2B7 532 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 GMPR2Q9P2T1 348 aaKnown RBP19.74■□□□□ 0.75
CSPG5-201ENST00000264723 RAB26Q9ULW5 256 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 FADS3Q9Y5Q0 445 aa19.74■□□□□ 0.75
CSPG5-201ENST00000264723 MAN1A2O60476 641 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 KCNA5P22460 613 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 SERPINA4P29622 427 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 DGCR6Q14129 220 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 LRRC73Q5JTD7 316 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 OLFM1Q99784 485 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 ARMC7Q9H6L4 198 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 CLK4Q9HAZ1 481 aaKnown RBP19.73■□□□□ 0.75
CSPG5-201ENST00000264723 RAD51BO15315 384 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 CXCL14O95715 111 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 PRSS56P0CW18 603 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 TLE2Q04725 743 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 ALFQ53S48 1182 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 RABL3Q5HYI8 236 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 LDLRAP1Q5SW96 308 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 CACHD1Q5VU97 1274 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 NPAS4Q8IUM7 802 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 TMEM74Q96NL1 305 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 NDST3O95803 873 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 HAPLN1P10915 354 aaPredicted RBP19.73■□□□□ 0.75
CSPG5-201ENST00000264723 SPESP1Q6UW49 350 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 GCNT7Q6ZNI0 430 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 UTS2BQ765I0 119 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 HAPLN3Q96S86 360 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 PNPLA3Q9NST1 481 aa19.73■□□□□ 0.75
CSPG5-201ENST00000264723 CLDN11O75508 207 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 ARSDP51689 593 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 IL5RAQ01344 420 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 SULT2A1Q06520 285 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 CENPLQ8N0S6 344 aaPredicted RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 BDH2Q9BUT1 245 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 KIFC1Q9BW19 673 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 WDR6Q9NNW5 1121 aaKnown RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 DOLKQ9UPQ8 538 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 A0A0U1RQS6 177 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 PPP6CO00743 305 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 YBEYP58557 167 aaPredicted RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 TRIP4Q15650 581 aaPredicted RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 GPR62Q9BZJ7 368 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 CACNA2D2Q9NY47 1150 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 MARCH4Q9P2E8 410 aaPredicted RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 TDRKHQ9Y2W6 561 aaKnown RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 CPSF4O95639 269 aaKnown RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 CNPP09543 421 aaKnown RBP19.72■□□□□ 0.75
CSPG5-201ENST00000264723 CLCQ05315 142 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 TTC9BQ8N6N2 239 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 BBS2Q9BXC9 721 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 DPY30Q9C005 99 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 PLAC1Q9HBJ0 212 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
CSPG5-201ENST00000264723 SLC38A8A6NNN8 435 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 M0R3G1 203 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 SYN3O14994 580 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 OR4F21O95013 312 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 GSNP06396 782 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 C1QTNF8P60827 252 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 RPL38P63173 70 aaKnown RBP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 LIPEQ05469 1076 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 CPSF6Q16630 551 aaKnown RBP eCLIP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 PARP15Q460N3 678 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 KBTBD6Q86V97 674 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 ST13P5Q8NFI4 369 aaPredicted RBP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 CIDEBQ9UHD4 219 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 OAZ3Q9UMX2 235 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 MBLAC1A4D2B0 266 aaPredicted RBP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 EVPLLA8MZ36 301 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 AGRPO00253 132 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms