RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CYP4Z2PQ8N1L4 340 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF614Q8N883 585 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 OR8D1Q8WZ84 308 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 C8orf48Q96LL4 319 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ARMC7Q9H6L4 198 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 CRTAC1Q9NQ79 661 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 CPQQ9Y646 472 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 TLL1O43897 1013 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 PROZP22891 400 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 FGD3Q5JSP0 725 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 NLNQ9BYT8 704 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ADAMTS10Q9H324 1103 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 MUC13Q9H3R2 512 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 SYNDIG1Q9H7V2 258 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 NOL11Q9H8H0 719 aaKnown RBP16.65■□□□□ 0.26
PHRF1-201ENST00000264555 IPPKQ9H8X2 491 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF358Q9NW07 568 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 FKBPLQ9UIM3 349 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 HS3ST4Q9Y661 456 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 MYH8P13535 1937 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 CST1P01037 141 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 KRT8P05787 483 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 MAPK9P45984 424 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 SPESP1Q6UW49 350 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 RAVER1Q8IY67 606 aaKnown RBP16.64■□□□□ 0.25
PHRF1-201ENST00000264555 DCUN1D5Q9BTE7 237 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 FCF1Q9Y324 198 aaKnown RBP16.64■□□□□ 0.25
PHRF1-201ENST00000264555 RGS5O15539 181 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 EDIL3O43854 480 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 GJA9P57773 515 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 ARL14EPQ8N8R7 260 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-201ENST00000264555 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 ENTPD4Q9Y227 616 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 VPS26BQ4G0F5 336 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 REP15Q6BDI9 236 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 PAGE2Q7Z2X7 111 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 OR2T12Q8NG77 320 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 OR2T34Q8NGX1 318 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 OR2T3Q8NH03 318 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 LRTM1Q9HBL6 345 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 CYTH4Q9UIA0 394 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 UBXN8O00124 270 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 PGM3O95394 542 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 SLC10A7Q0GE19 358 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 RALGDSQ12967 914 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 ANXA8L1Q5VT79 327 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 PLPP4Q5VZY2 271 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 TPGS2Q68CL5 300 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 R3HCC1LQ7Z5L2 792 aaKnown RBP16.64■□□□□ 0.25
PHRF1-201ENST00000264555 NAT16Q8N8M0 369 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 C4AP0C0L4 1744 aa16.64■□□□□ 0.25
PHRF1-201ENST00000264555 DYRK3O43781 588 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 NTSP30990 170 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 KRR1Q13601 381 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 SIX1Q15475 284 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ZNF605Q86T29 641 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 KRT73Q86Y46 540 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 PIWIL1Q96J94 861 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ADAM7Q9H2U9 754 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 C8orf4Q9NR00 106 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 VPS4AQ9UN37 437 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ARL5AQ9Y689 179 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 OCM2P0CE71 109 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 OCMP0CE72 109 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ZIK1Q3SY52 487 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 SERPINA9Q86WD7 417 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 LPGAT1Q92604 370 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 PHF21AQ96BD5 680 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ROPN1LQ96C74 230 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 TFB2MQ9H5Q4 396 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 DNAJC11Q9NVH1 559 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 MFHAS1Q9Y4C4 1052 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ITGB4P16144 1822 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 ARVCFO00192 962 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 GSTT1P30711 240 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 TSNQ15631 228 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 IGDCC3Q8IVU1 814 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 GPR156Q8NFN8 814 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 POP4O95707 220 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 GNRH1P01148 92 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 CHRNGP07510 517 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 PPIBP23284 216 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 RALGPS1Q5JS13 557 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 EMC10Q5UCC4 262 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 NUSAP1Q9BXS6 441 aaKnown RBP16.63■□□□□ 0.25
PHRF1-201ENST00000264555 TNKS2Q9H2K2 1166 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 RPS6KB2Q9UBS0 482 aa16.63■□□□□ 0.25
PHRF1-201ENST00000264555 H3BN98 237 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 GSSP48637 474 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 USP29Q9HBJ7 922 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 A0A088AWK7 358 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 KRT75O95678 551 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 ZNF10P21506 573 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 DNAJB1P25685 340 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 WNT7BP56706 349 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 C6orf89Q6UWU4 347 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 ZC3HC1Q86WB0 502 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CDK20Q8IZL9 346 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 SFRP1Q8N474 314 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms