RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 ITGB1P05556 798 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 CAPGP40121 348 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 PYCR3Q53H96 274 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF549Q6P9A3 640 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 RNF168Q8IYW5 571 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 TRPV3Q8NET8 790 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 CCDC138Q96M89 665 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 RPRD1AQ96P16 312 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 CHID1Q9BWS9 393 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 PFDN4Q9NQP4 134 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 SLC38A7Q9NVC3 462 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 ACTR3BQ9P1U1 418 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 BRCA1P38398 1863 aaKnown RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 SH3PXD2BA1X283 911 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 PTGES3LE9PB15 166 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 FGF10O15520 208 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF189O75820 626 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 GGT5P36269 586 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 POLD2P49005 469 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 CCT8P50990 548 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 OR4D2P58180 307 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 CDC42EP1Q00587 391 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 NRG1Q02297 640 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF235Q14590 738 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 IHHQ14623 411 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 SLC36A3Q495N2 470 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 UGT3A1Q6NUS8 523 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 PTCD2Q8WV60 388 aaKnown RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 DPF3Q92784 378 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 FAM210AQ96ND0 272 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 TNS1Q9HBL0 1735 aaKnown RBP12.33□□□□□ -0.44
CHMP3-201ENST00000263856 AQP12BA6NM10 295 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 GOLGA8CPA6NN73 597 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BBIP1A8MTZ0 92 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 H0YJX3 145 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TOR1BO14657 336 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 SOAT2O75908 522 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 F2P00734 622 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 C1RP00736 705 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 FUT4P22083 530 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 PIK3CGP48736 1102 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CRYBB1P53674 252 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BNIP2Q12982 314 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 NR1D2Q14995 579 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 AQP12AQ8IXF9 295 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 HS3ST5Q8IZT8 346 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CFAP52Q8N1V2 620 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 LZTR1Q8N653 840 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 EFHBQ8N7U6 833 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TRMOQ9BU70 441 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 SPON2Q9BUD6 331 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BPIFA1Q9NP55 256 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ABCC13Q9NSE7 274 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CYBBP04839 570 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF37AP17032 561 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 MATN1P21941 496 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ACVRL1P37023 503 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 PSMD8P48556 350 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ACADVLP49748 655 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 DGKQP52824 942 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TSPY1Q01534 308 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 GLYATQ6IB77 296 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 MRNIPQ6NTE8 343 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 OR10Q1Q8NGQ4 319 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 LZICQ8WZA0 190 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 PLEKHA8Q96JA3 519 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BIRC8Q96P09 236 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 RTP3Q9BQQ7 232 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 HGH1Q9BTY7 390 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 MRGBPQ9NV56 204 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TRNAU1APQ9NX07 287 aaKnown RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CD274Q9NZQ7 290 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 GALPQ9UBC7 116 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 NEU3Q9UQ49 428 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 U3KQV3 271 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 OTOFQ9HC10 1997 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TSC2P49815 1807 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 K7EPI3 171 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 GMNNO75496 209 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 OR4F21O95013 312 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BCL10O95999 233 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CHEK2O96017 543 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms