RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 SERPINA13PQ6UXR4 307 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 ZBTB46Q86UZ6 589 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 UXS1Q8NBZ7 420 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 MTMR14Q8NCE2 650 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 PPCDCQ96CD2 204 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 ZNF607Q96SK3 696 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 PRDM8Q9NQV8 689 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 GMIPQ9P107 970 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 ZNF490Q9ULM2 529 aaPredicted RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 RAI2Q9Y5P3 530 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 TREHO43280 583 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 TMCC2O75069 709 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 TNFRSF21O75509 655 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 TRMUO75648 421 aaKnown RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 MT-CYBP00156 380 aaPredicted RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 PIGRP01833 764 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 PCSK2P16519 638 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 BMP7P18075 431 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 PEX2P28328 305 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 NMBRP28336 390 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 LIPEQ05469 1076 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 IL23RQ5VWK5 629 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 CLEC6AQ6EIG7 209 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 DENND5AQ6IQ26 1287 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 C16orf62Q7Z3J2 963 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 ZNF655Q8N720 491 aaPredicted RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 UBR7Q8N806 425 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 ROPN1LQ96C74 230 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 CENPNQ96H22 339 aaPredicted RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 SNX27Q96L92 541 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 FBXL18Q96ME1 805 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 WDR12Q9GZL7 423 aaKnown RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 CRISPLD1Q9H336 500 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 TIMMDC1Q9NPL8 285 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 KIAA1522Q9P206 1035 aaPredicted RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 SLC26A3P40879 764 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 STAT5AP42229 794 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 CPTPQ5TA50 214 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 DCAF12L1Q5VU92 463 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.71□□□□□ -0.7
CD44-201ENST00000263398 TAC4Q86UU9 113 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 PCED1BQ96HM7 432 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 AGAP2Q99490 1192 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 WRAP73Q9P2S5 460 aaPredicted RBP10.71□□□□□ -0.7
CD44-201ENST00000263398 RAPGEFL1Q9UHV5 662 aa10.71□□□□□ -0.7
CD44-201ENST00000263398 ELOVL7A1L3X0 281 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 UGT2B11O75310 529 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ADH1AP07327 375 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 TACR2P21452 398 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 HNF4AP41235 474 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 RPS9P46781 194 aaKnown RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 ZDHHC20Q5W0Z9 365 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 SLC24A5Q71RS6 500 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 LDB1Q86U70 411 aaPredicted RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 CBR4Q8N4T8 237 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 FAM81AQ8TBF8 368 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 RBM4BQ9BQ04 359 aaKnown RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 DPEP3Q9H4B8 488 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 IPPKQ9H8X2 491 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 DNAJC11Q9NVH1 559 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ASF1AQ9Y294 204 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 TAF4O00268 1085 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 AP3D1O14617 1153 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ERAL1O75616 437 aaKnown RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 METTL18O95568 372 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 NUDT14O95848 222 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 UROSP10746 265 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ASPAP45381 313 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 CCR4P51679 360 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 BIKQ13323 160 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ACSBG2Q5FVE4 666 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 RALGPS1Q5JS13 557 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 C6orf52Q5T4I8 152 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 KIAA0930Q6ICG6 404 aaPredicted RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 RALGPS2Q86X27 583 aaPredicted RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 RTL3Q8N8U3 475 aaKnown RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 MCFD2Q8NI22 146 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 FNDC11Q9BVV2 318 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 MAGEH1Q9H213 219 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ABCG8Q9H221 673 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ALG2Q9H553 416 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 BCAS3Q9H6U6 928 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 PTGFRNQ9P2B2 879 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 FBXW11Q9UKB1 542 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ZNF214Q9UL59 606 aaPredicted RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 FZD10Q9ULW2 581 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 PADI3Q9ULW8 664 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 ZNF510Q9Y2H8 683 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 MRPS23Q9Y3D9 190 aaKnown RBP10.7□□□□□ -0.7
CD44-201ENST00000263398 TRIM17Q9Y577 477 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 GLYATL1P3A0A0U1RQE8 302 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 HAT1O14929 419 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 SLC22A2O15244 555 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 SERPINA1P01009 418 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 TRBC1P01850 177 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 OR4Q2P0C623 313 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 THRBP10828 461 aa10.7□□□□□ -0.7
CD44-201ENST00000263398 CDH3P22223 829 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms