RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CHRNA6Q15825 494 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 RNF187Q5TA31 235 aaPredicted RBP27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 CTAGE3PQ8IX95 158 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ZNF473Q8WTR7 871 aaKnown RBP27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ANKRD27Q96NW4 1050 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ZIM3Q96PE6 472 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 POC1B-GALNT4F8VUJ3 575 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 TSPAN6O43657 245 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 RNGTTO60942 597 aaKnown RBP27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ABHD2P08910 425 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 PAMP19021 973 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 CTBP1Q13363 440 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 PIANPQ8IYJ0 282 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 PPM1NQ8N819 430 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 NAT14Q8WUY8 206 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 TOE1Q96GM8 510 aaKnown RBP27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 RIOK2Q9BVS4 552 aaKnown RBP27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 BTBD1Q9H0C5 482 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ACSS3Q9H6R3 686 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 PKD2L2Q9NZM6 624 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 RIMKLBQ9ULI2 386 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 FAM86C2PA6NEL3 165 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 FAM107AO95990 144 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 PSMA3P25788 255 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 STX2P32856 288 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 SPAM1P38567 509 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 SLCO1A2P46721 670 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 ZRANB3Q5FWF4 1079 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 PSAPL1Q6NUJ1 521 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 CCDC97Q96F63 343 aaPredicted RBP27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 NFS1Q9Y697 457 aa27.34■■□□□ 1.97
SMARCD3-201ENST00000262188 FAM159BA6NKW6 160 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 H0Y858 1186 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 K7ESM1 405 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 PDLIM1O00151 329 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 WNT9AO14904 365 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 DNAJC8O75937 253 aaPredicted RBP27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 PRAMEF1O95521 474 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 TSHRP16473 764 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 HADHAP40939 763 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 CCR3P51677 355 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 CLCN5P51795 746 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 MGAT5Q09328 741 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 CCDC15Q0P6D6 951 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 IQCKQ8N0W5 287 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 OR4L1Q8NH43 312 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 EPS8L3Q8TE67 593 aaKnown RBP27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 DTD2Q96FN9 168 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 MYOCQ99972 504 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 GLYATL1P3A0A0U1RQE8 302 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 SLC7A4O43246 635 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 SPAG6O75602 509 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 PAK4O96013 591 aaPredicted RBP27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 GSTA2P09210 222 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 MPP1Q00013 466 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 THOC5Q13769 683 aaKnown RBP27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 C1QTNF12Q5T7M4 302 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 TEDDM1Q5T9Z0 273 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 PDPK2PQ6A1A2 396 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 ZNF470Q6ECI4 717 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 NEPROQ6NW34 567 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 DEFB119Q8N690 84 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 PEX13Q92968 403 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 FAM83DQ9H4H8 585 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 C6orf106Q9H6K1 298 aaPredicted RBP27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 FZD3Q9NPG1 666 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 CTNNAL1Q9UBT7 734 aa27.33■■□□□ 1.97
SMARCD3-201ENST00000262188 EXOC1LA0A1B0GW35 172 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 SRP72O76094 671 aaKnown RBP27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 GCAP28676 217 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 FOXN2P32314 431 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 LSP1P33241 339 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 SLC1A2P43004 574 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF789Q5FWF6 425 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 SPATA16Q9BXB7 569 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 ZFATQ9P243 1243 aa27.32■■□□□ 1.96
SMARCD3-201ENST00000262188 IGHV1OR15-9A0A0B4J2B8 117 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 TM7SF2O76062 418 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 SEMA4FO95754 770 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 ATP13A5Q4VNC0 1218 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 AFTPHQ6ULP2 937 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 CAMKK1Q8N5S9 505 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 NUS1Q96E22 293 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 DTNBP1Q96EV8 351 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 CYTH2Q99418 400 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 GPR174Q9BXC1 333 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 CATSPERZQ9NTU4 200 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 WDFY4Q6ZS81 3184 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF106Q9H2Y7 1883 aaKnown RBP27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 H7C0S8 307 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 CD3EAPO15446 510 aaKnown RBP27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 NUDT17P0C025 328 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 TMEM259Q4ZIN3 620 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 SPDYCQ5MJ68 293 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 PLA2G15Q8NCC3 412 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 AP2M1Q96CW1 435 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 ASB8Q9H765 288 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 TMPRSS11EQ9UL52 423 aa27.31■■□□□ 1.96
SMARCD3-201ENST00000262188 FADS2P1A8MWK0 482 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 PSMD11O00231 422 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms