RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 GNPDA1P46926 289 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 RERGQ96A58 199 aaPredicted RBP14.93□□□□□ -0.02
UBE4B-201ENST00000253251 MECRQ9BV79 373 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 MAN1C1Q9NR34 630 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 CACNG4Q9UBN1 327 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 FAM159BA6NKW6 160 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 FFAR3O14843 346 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 GPR42O15529 346 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 SLC22A3O75751 556 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 FAM155BO75949 473 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 PSMG1O95456 288 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 PQLC3Q8N755 202 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 OR2AP1Q8NGE2 309 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 CNBD2Q96M20 576 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D10AQ9BXI6 508 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 PCBD2Q9H0N5 130 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 PNPOQ9NVS9 261 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 RNASEH2AO75792 299 aaKnown RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 OCM2P0CE71 109 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 OCMP0CE72 109 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 TCF4P15884 667 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 EPHA3P29320 983 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 GRSF1Q12849 480 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 AAGABQ6PD74 315 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 ZNF280BQ86YH2 543 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 RNPEPL1Q9HAU8 725 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 GKN1Q9NS71 199 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 COLEC10Q9Y6Z7 277 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 AGPSO00116 658 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 PRAMEF11O60813 436 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 ELF3P78545 371 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 CPSF6Q16630 551 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 SLC39A5Q6ZMH5 540 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 RNF19BQ6ZMZ0 732 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 MUC13Q9H3R2 512 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 VPS4AQ9UN37 437 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 AKAP11Q9UKA4 1901 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 ZNF30P17039 623 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 SLC26A3P40879 764 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 CCNFP41002 786 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 SLC10A7Q0GE19 358 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 MBLAC2Q68D91 279 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 ANKLE1Q8NAG6 615 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 GDPD5Q8WTR4 605 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 PEX13Q92968 403 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 RNF145Q96MT1 663 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 SEPHS2Q99611 448 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 HERC2P3Q9BVR0 1158 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 ANGPT4Q9Y264 503 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 M0QZQ0 153 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 SLC22A2O15244 555 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 LYPLA1O75608 230 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 CLDN9O95484 217 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 UBTFL6P0CB48 400 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 UROSP10746 265 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 CLK1P49759 484 aaKnown RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 PRKD1Q15139 912 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 CRTC3Q6UUV7 619 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 GDPD4Q6W3E5 623 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 LRRC74BQ6ZQY2 392 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 ADCK1Q86TW2 530 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 SPATA6LQ8N4H0 392 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 C19orf60Q96EN9 201 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 APOL4Q9BPW4 351 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 POLMQ9NP87 494 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-201ENST00000253251 KRT84Q9NSB2 600 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 DLGAP2Q9P1A6 1054 aa14.92□□□□□ -0.02
UBE4B-201ENST00000253251 MYADML2A6NDP7 307 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 SAC3D1A6NKF1 404 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 ISM1B1AKI9 464 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 HAS3O00219 553 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 PDE5AO76074 875 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 ADH5P11766 374 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 S100A5P33763 92 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 TAS2R39P59534 338 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 ALDH6A1Q02252 535 aaKnown RBP14.91□□□□□ -0.02
UBE4B-201ENST00000253251 DNAJC14Q6Y2X3 702 aaPredicted RBP14.91□□□□□ -0.02
UBE4B-201ENST00000253251 GALNT13Q8IUC8 556 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 ZDHHC13Q8IUH4 622 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 ZNF614Q8N883 585 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 MTFMTQ96DP5 389 aaKnown RBP14.91□□□□□ -0.02
UBE4B-201ENST00000253251 MTRRQ9UBK8 725 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 BTRCQ9Y297 605 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 KRT87PA6NCN2 255 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 RPIAP49247 311 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 CDH13P55290 713 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 TXNDC8Q6A555 127 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 CNTD1Q8N815 330 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 TMEM189-UBE2V1I3L0A0 370 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 APOA1P02647 267 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 PFKLP17858 780 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 HSD17B2P37059 387 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 PTPN5P54829 565 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 SMIM11AP58511 58 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 ZNHIT3Q15649 155 aaPredicted RBP14.91□□□□□ -0.02
UBE4B-201ENST00000253251 TRIM40Q6P9F5 258 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 CAMK1DQ8IU85 385 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 UMODL1-AS1Q8N2C9 162 aa14.91□□□□□ -0.02
UBE4B-201ENST00000253251 POLR3BQ9NW08 1133 aaPredicted RBP14.91□□□□□ -0.02
UBE4B-201ENST00000253251 SLX4Q8IY92 1834 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms