RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 DNAJC5GQ8N7S2 189 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CD200R1Q8TD46 325 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 KCNJ9Q92806 393 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CATSPER2Q96P56 530 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 MEAF6Q9HAF1 191 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 TRAF6Q9Y4K3 522 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 NOTCH4Q99466 2003 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 C1orf232A0A0U1RR37 186 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CCDC189A1A4V9 331 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 LRRC14BA6NHZ5 514 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CDC7O00311 574 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 SKAP2O75563 359 aaPredicted RBP18.37■□□□□ 0.53
HOXC11-201ENST00000243082 SIX3O95343 332 aaPredicted RBP18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CLDN7O95471 211 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 ESR1P03372 595 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 EN2P19622 333 aaPredicted RBP18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CA5AP35218 305 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 PPARGP37231 505 aaPredicted RBP18.37■□□□□ 0.53
HOXC11-201ENST00000243082 C1QTNF8P60827 252 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 NTHL1P78549 312 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 SATB1Q01826 763 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 ARHGAP15Q53QZ3 475 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 GRIN3AQ8TCU5 1115 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 ISG20Q96AZ6 181 aaKnown RBP18.37■□□□□ 0.53
HOXC11-201ENST00000243082 C19orf43Q9BQ61 176 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 LINC00597Q9H2U6 94 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 EBF2Q9HAK2 575 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 SLC7A8Q9UHI5 535 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 COMMD10Q9Y6G5 202 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 CAPN8A6NHC0 703 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 NEDD8-MDP1E9PL57 170 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 SLC22A2O15244 555 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 ARHGEF15O94989 841 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 SERPINA4P29622 427 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 ADSLP30566 484 aaPredicted RBP18.36■□□□□ 0.53
HOXC11-201ENST00000243082 HOXA9P31269 272 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 CDH13P55290 713 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 SNRPD1P62314 119 aaKnown RBP18.36■□□□□ 0.53
HOXC11-201ENST00000243082 TSNQ15631 228 aaKnown RBP18.36■□□□□ 0.53
HOXC11-201ENST00000243082 MYLK3Q32MK0 819 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 FAM219BQ5XKK7 198 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 C22orf39Q6P5X5 142 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 FAM151BQ6UXP7 276 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 STK40Q8N2I9 435 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 CEP70Q8NHQ1 597 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 FUBP1Q96AE4 644 aaKnown RBP18.36■□□□□ 0.53
HOXC11-201ENST00000243082 CCDC97Q96F63 343 aaPredicted RBP18.36■□□□□ 0.53
HOXC11-201ENST00000243082 RTKNQ9BST9 563 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 DCLRE1BQ9H816 532 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 TRMT6Q9UJA5 497 aaKnown RBP18.36■□□□□ 0.53
HOXC11-201ENST00000243082 RNF112Q9ULX5 631 aa18.36■□□□□ 0.53
HOXC11-201ENST00000243082 MYO7AQ13402 2215 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 RGSL1A5PLK6 1076 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 GRM6O15303 877 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ECI2O75521 394 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ANP32DO95626 131 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CHRM3P20309 590 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ITGAXP20702 1163 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 INHBCP55103 352 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 SH3BP2P78314 561 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 UBE3AQ05086 875 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PREPLQ4J6C6 727 aaPredicted RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PRSS36Q5K4E3 855 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CERS6Q6ZMG9 384 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 NET1Q7Z628 596 aaPredicted RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 RAB44Q7Z6P3 723 aaPredicted RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PELI3Q8N2H9 469 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 AFAP1L2Q8N4X5 818 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ACTRT2Q8TDY3 377 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 EEF1AKMT1Q8WVE0 214 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 IRF7Q92985 503 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 MARK4Q96L34 752 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 BBS2Q9BXC9 721 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 IL26Q9NPH9 171 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 NOP53Q9NZM5 478 aaKnown RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 HCFC2Q9Y5Z7 792 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 COPG1Q9Y678 874 aaKnown RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 NPEPPSL1A6NEC2 478 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 IQCF5A8MTL0 148 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 H0Y3Z8 333 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PPP6CO00743 305 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PRMT5O14744 637 aaPredicted RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CLASP2O75122 1294 aaKnown RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PRAMEF1O95521 474 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 LMNAP02545 664 aaKnown RBP18.35■□□□□ 0.53
HOXC11-201ENST00000243082 THRAP10827 490 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 GFAPP14136 432 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 GNAZP19086 355 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CLCN7P51798 805 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CUL3Q13618 768 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ZNF77Q15935 545 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 UGT3A2Q3SY77 523 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CLEC6AQ6EIG7 209 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 CYHR1Q6ZMK1 362 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 SERPINA9Q86WD7 417 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 PAF1Q8N7H5 531 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ECHDC3Q96DC8 303 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 ZSWIM3Q96MP5 696 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 LYSMD1Q96S90 227 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms