RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 MTF2Q9Y483 593 aaPredicted RBP7.4□□□□□ -1.22
MED28-201ENST00000237380 OR5K4A6NMS3 321 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 TRUB2O95900 331 aaKnown RBP7.4□□□□□ -1.22
MED28-201ENST00000237380 HEXAP06865 529 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 PLP2Q04941 152 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 CATSPEREQ5SY80 951 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 TMC5Q6UXY8 1006 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 SV2AQ7L0J3 742 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 PIWIL4Q7Z3Z4 852 aaKnown RBP7.4□□□□□ -1.22
MED28-201ENST00000237380 CPNE9Q8IYJ1 553 aa7.4□□□□□ -1.22
MED28-201ENST00000237380 TRNT1Q96Q11 434 aaKnown RBP7.4□□□□□ -1.22
MED28-201ENST00000237380 MYO5BQ9ULV0 1848 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 FAM92AA1XBS5 289 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PRORSD1PA6NEY8 169 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 OR2AG2A6NM03 316 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 NUDT1P36639 197 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 SWI5Q1ZZU3 235 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PHF19Q5T6S3 580 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 TTC27Q6P3X3 843 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 CNSTQ6PJW8 725 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 SMIM5Q71RC9 77 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 MCOLN2Q8IZK6 566 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 OR4C6Q8NH72 309 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 CASD1Q96PB1 797 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PAFAH2Q99487 392 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PTGFRNQ9P2B2 879 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 KLQ9UEF7 1012 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PHTF1Q9UMS5 762 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 COL14A1Q05707 1796 aaKnown RBP7.4□□□□□ -1.23
MED28-201ENST00000237380 EDDM13A0A1B0GTR0 161 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PP2D1A8MPX8 630 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PRKAR1AP10644 381 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 CCNYL2Q5T2Q4 361 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 STK32CQ86UX6 486 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PHF21BQ96EK2 531 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 APOPT1Q96IL0 206 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 TDRD1Q9BXT4 1180 aaKnown RBP7.4□□□□□ -1.23
MED28-201ENST00000237380 ULBP1Q9BZM6 244 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 SNX13Q9Y5W8 968 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 H0Y858 1186 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 SCDO00767 359 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 DLX3O60479 287 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 KAT7O95251 611 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 PCCBP05166 539 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 OR1D2P34982 312 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 CCZ1BP86790 482 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 CCZ1P86791 482 aaPredicted RBP7.4□□□□□ -1.23
MED28-201ENST00000237380 TBX2Q13207 712 aaPredicted RBP7.4□□□□□ -1.23
MED28-201ENST00000237380 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 TRPM4Q8TD43 1214 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 THAP2Q9H0W7 228 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 TMBIM4Q9HC24 238 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 CFAP97Q9P2B7 532 aa7.4□□□□□ -1.23
MED28-201ENST00000237380 NDRG2Q9UN36 371 aaKnown RBP7.4□□□□□ -1.23
MED28-201ENST00000237380 LRIG2O94898 1065 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ADSLP30566 484 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 RAP1GAPP47736 663 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 PPIDQ08752 370 aaKnown RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 C10orf62Q5T681 223 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 ALKBH2Q6NS38 261 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 VITQ6UXI7 678 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 POLNQ7Z5Q5 900 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 METTL16Q86W50 562 aaKnown RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 ZNF276Q8N554 614 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 SEC16BQ96JE7 1060 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 PELOQ9BRX2 385 aaKnown RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 CHKBQ9Y259 395 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 SH3PXD2BA1X283 911 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 CCL16O15467 120 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ARP10275 920 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 OC90Q02509 493 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 SLC25A52Q3SY17 297 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 MINDY4Q4G0A6 757 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 EMC10Q5UCC4 262 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 RAP1GAP2Q684P5 730 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ZNF730Q6ZMV8 503 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 TMPRSS6Q8IU80 811 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 C8orf59Q8N0T1 100 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 DNASE1L2Q92874 299 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 NELL2Q99435 816 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 CDCA3Q99618 268 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 SEC14L3Q9UDX4 400 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 FOXN3O00409 490 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 APBB3O95704 486 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 FAM163BP0C2L3 166 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 SRP54P61011 504 aaKnown RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 GSTM4Q03013 218 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 RSBN1Q5VWQ0 802 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 MED27Q6P2C8 311 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 KBTBD7Q8WVZ9 684 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ZBED6CLQ96FA7 236 aaPredicted RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 FRMD6Q96NE9 622 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 USB1Q9BQ65 265 aaKnown RBP7.39□□□□□ -1.23
MED28-201ENST00000237380 HEPHQ9BQS7 1158 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ZCWPW1Q9H0M4 648 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 TMEM138Q9NPI0 162 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 ING4Q9UNL4 249 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 FAM221BA6H8Z2 402 aa7.39□□□□□ -1.23
MED28-201ENST00000237380 DDX3YO15523 660 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms