RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 GABPB2Q8TAK5 448 aaPredicted RBP13.95□□□□□ -0.18
SEC61B-201ENST00000223641 UHMK1Q8TAS1 419 aaKnown RBP13.95□□□□□ -0.18
SEC61B-201ENST00000223641 SLC44A1Q8WWI5 657 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 ORAI3Q9BRQ5 295 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 FAM126AQ9BYI3 521 aaPredicted RBP13.95□□□□□ -0.18
SEC61B-201ENST00000223641 VIPAS39Q9H9C1 493 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 EBF2Q9HAK2 575 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 UGT1A7Q9HAW7 530 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 UGT1A10Q9HAW8 530 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 UGT1A8Q9HAW9 530 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 PPANQ9NQ55 473 aaKnown RBP13.95□□□□□ -0.18
SEC61B-201ENST00000223641 IARS2Q9NSE4 1012 aaKnown RBP13.95□□□□□ -0.18
SEC61B-201ENST00000223641 NSMCE4AQ9NXX6 385 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 EURLQ9NYK6 297 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 ZFATQ9P243 1243 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 FBXO5Q9UKT4 447 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 CNOT6Q9ULM6 557 aaKnown RBP13.95□□□□□ -0.18
SEC61B-201ENST00000223641 PLAAQ9Y263 795 aa13.95□□□□□ -0.18
SEC61B-201ENST00000223641 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 PRR23AA6NEV1 266 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 GOLGA8CPA6NN73 597 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 METTL12A8MUP2 240 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 K7ESM1 405 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 RAD51BO15315 384 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 GPR39O43194 453 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 GPR37L1O60883 481 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 S1PR4O95977 384 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 AHSGP02765 367 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 SLC1A2P43004 574 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 FNTBP49356 437 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 EIF3BP55884 814 aaKnown RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 CTBP1Q13363 440 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 EFTUD2Q15029 972 aaKnown RBP eCLIP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZRANB3Q5FWF4 1079 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 LYPLAL1Q5VWZ2 237 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF470Q6ECI4 717 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 PNCKQ6P2M8 343 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 LRIG3Q6UXM1 1119 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 HDXQ7Z353 690 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 TDRPQ86YL5 185 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 NXPE1Q8N323 547 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 BTN2A2Q8WVV5 523 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 KLK6Q92876 244 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 BIRC7Q96CA5 298 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 SPACA7Q96KW9 195 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZIM3Q96PE6 472 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 C1QTNF7Q9BXJ2 289 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ROPN1BQ9BZX4 212 aaPredicted RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ROPN1Q9HAT0 212 aaPredicted RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 MBNL1Q9NR56 388 aaKnown RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 INTS10Q9NVR2 710 aaKnown RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF446Q9NWS9 450 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 SLC24A2Q9UI40 661 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF180Q9UJW8 692 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 DMTF1Q9Y222 760 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.94□□□□□ -0.18
SEC61B-201ENST00000223641 PSAT1Q9Y617 370 aa13.94□□□□□ -0.18
SEC61B-201ENST00000223641 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 PRR33A8MZF0 331 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 HNRNPA2B1P22626 353 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 ACRV1P26436 265 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 MAT2AP31153 395 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 TTPAP49638 278 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 NUBP1P53384 320 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 CSE1LP55060 971 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 CSTF1Q05048 431 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 ITIH4Q14624 930 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 IRF4Q15306 451 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 SMAD1Q15797 465 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 AARS2Q5JTZ9 985 aaKnown RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 ADAMTSL4Q6UY14 1074 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 SERPINA9Q86WD7 417 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 CTAGE3PQ8IX95 158 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 PPM1NQ8N819 430 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 PNPLA1Q8N8W4 532 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 TMEM145Q8NBT3 493 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 DDHD1Q8NEL9 900 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 OR2W6PQ8NHA6 318 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 DCAKDQ8WVC6 231 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 GLYATL1Q969I3 302 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 ULK4Q96C45 1275 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 COX14Q96I36 57 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 PAFAH2Q99487 392 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 CPNE1Q99829 537 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 TEX101Q9BY14 249 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
SEC61B-201ENST00000223641 FAM96AQ9H5X1 160 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 ZDHHC3Q9NYG2 299 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 SLC17A6Q9P2U8 582 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 FNDC3AQ9Y2H6 1198 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms