RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 CARSP49589 748 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 CDKN1CP49918 316 aaPredicted RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 THOP1P52888 689 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 YPEL5P62699 121 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 PDIA2Q13087 525 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 FASTKD3Q14CZ7 662 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 SF3A2Q15428 464 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 SMAD1Q15797 465 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 DNAJC21Q5F1R6 531 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 ZNF648Q5T619 568 aaPredicted RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 ADAMTSL4Q6UY14 1074 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 NLRP9Q7RTR0 991 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 ANKMY2Q8IV38 441 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 PNPLA1Q8N8W4 532 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 ZNF398Q8TD17 642 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 PTCD2Q8WV60 388 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 STAMBPL1Q96FJ0 436 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 WDR83Q9BRX9 315 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 ASB8Q9H765 288 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 MRM3Q9HC36 420 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 GPR27Q9NS67 375 aa14.9□□□□□ -0.02
RPA3-201ENST00000223129 ZNF106Q9H2Y7 1883 aaKnown RBP14.9□□□□□ -0.02
RPA3-201ENST00000223129 MAGEB16A2A368 324 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 TMEM202A6NGA9 273 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 H7C0S8 307 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 KHNYNO15037 678 aaKnown RBP14.89□□□□□ -0.03
RPA3-201ENST00000223129 NXPH1P58417 271 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 CAV1Q03135 178 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 ACVR1Q04771 509 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 OVGP1Q12889 678 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 GRIK2Q13002 908 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 ZNF542PQ5EBM4 170 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 KCTD16Q68DU8 428 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 ENPP7Q6UWV6 458 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 RABEPKQ7Z6M1 372 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 OR6P1Q8NGX9 317 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 FAM174AQ8TBP5 190 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 RUBCNQ92622 972 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 SKA1Q96BD8 255 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
RPA3-201ENST00000223129 HIC2Q96JB3 615 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 EBNA1BP2Q99848 306 aaKnown RBP14.89□□□□□ -0.03
RPA3-201ENST00000223129 C19orf43Q9BQ61 176 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 PARD6AQ9NPB6 346 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 GDF3Q9NR23 364 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 PHPT1Q9NRX4 125 aaPredicted RBP14.89□□□□□ -0.03
RPA3-201ENST00000223129 IL1RAPL1Q9NZN1 696 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 RIMKLBQ9ULI2 386 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 PNMA8BQ9ULN7 279 aaPredicted RBP14.89□□□□□ -0.03
RPA3-201ENST00000223129 CHMP2BQ9UQN3 213 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 TMEM98Q9Y2Y6 226 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 OAS3Q9Y6K5 1087 aaKnown RBP14.89□□□□□ -0.03
RPA3-201ENST00000223129 RPS6KL1Q9Y6S9 549 aa14.89□□□□□ -0.03
RPA3-201ENST00000223129 TP53BP1Q12888 1972 aaPredicted RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 SPTY2D1-AS1A0A0U1RR47 76 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 FAM237BA0A1B0GVD1 139 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 CACNB4O00305 520 aaPredicted RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 SLC25A14O95258 325 aaPredicted RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 GOT2P00505 430 aaKnown RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 PYGLP06737 847 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 ZNF806P0C7X5 589 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 TEAD1P28347 426 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 POLD2P49005 469 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 PRAMEP78395 509 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 FZD2Q14332 565 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 NFATC4Q14934 902 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 ANKRD20A4Q4UJ75 823 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 ZRANB3Q5FWF4 1079 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 DOK6Q6PKX4 331 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 TMEM135Q86UB9 458 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 OR2I1PQ8NGU4 316 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 BTN2A2Q8WVV5 523 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 PEX13Q92968 403 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 GLYATL1Q969I3 302 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 COX14Q96I36 57 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 NUSAP1Q9BXS6 441 aaKnown RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 MRPL40Q9NQ50 206 aaKnown RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 SEMA4GQ9NTN9 838 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.88□□□□□ -0.03
RPA3-201ENST00000223129 TEX264Q9Y6I9 313 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 SLC30A1Q9Y6M5 507 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 TMEM131Q92545 1883 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 OTOGLQ3ZCN5 2332 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 GOLGA8KD6RF30 607 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 E7ESA3 106 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 MAGEC1O60732 1142 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 MTX2O75431 263 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 VAPBO95292 243 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 MYCLP1P12525 358 aaPredicted RBP14.88□□□□□ -0.03
RPA3-201ENST00000223129 TGM1P22735 817 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 CTSKP43235 329 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 NFATC2Q13469 925 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 ITGA9Q13797 1035 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 HLTFQ14527 1009 aaKnown RBP eCLIP14.88□□□□□ -0.03
RPA3-201ENST00000223129 CACNA1EQ15878 2313 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 PSAPL1Q6NUJ1 521 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 CENPUQ71F23 418 aa14.88□□□□□ -0.03
RPA3-201ENST00000223129 CCDC25Q86WR0 208 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms