RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ATXN1P54253 815 aaKnown RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 KCNJ11Q14654 390 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 CCL14Q16627 93 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 HIST2H2ACQ16777 129 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 FASTKD1Q53R41 847 aaKnown RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 Q5BKY6 102 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 FAM171BQ6P995 826 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SLC26A11Q86WA9 606 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 OFCC1Q8IZS5 231 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 CRYBG2Q8N1P7 616 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 CBR4Q8N4T8 237 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ANKRD52Q8NB46 1076 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 IL17RDQ8NFM7 739 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SLC2A14Q8TDB8 520 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 FUNDC2Q9BWH2 189 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 MYO18AQ92614 2054 aaKnown RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 APOL1O14791 398 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ABCB7O75027 752 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 NOS1APO75052 506 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SLITRK5O94991 958 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 PAHP00439 452 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 CD4P01730 458 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SLC7A1P30825 629 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 EIF2DP41214 584 aaKnown RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SEPHS1P49903 392 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 POLR2GP62487 172 aaKnown RBP eCLIP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 BEX3Q00994 111 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ZNF33BQ06732 778 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 TAF12Q16514 161 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 XKR4Q5GH76 650 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 XAF1Q6GPH4 301 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SLC16A12Q6ZSM3 486 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 LINC00518Q8N0U6 118 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 GTF2H4Q92759 462 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 RCN3Q96D15 328 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ASB9Q96DX5 294 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 BTN2A3PQ96KV6 586 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ASB2Q96Q27 587 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 TTYH2Q9BSA4 534 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 C11orf84Q9BUA3 381 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SPC25Q9HBM1 224 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ACOXLQ9NUZ1 547 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SYBUQ9NX95 663 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SAC3D1A6NKF1 404 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 RFPL1O75677 317 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 BMP2P12643 396 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 KCNE1P15382 129 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 TGM2P21980 687 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SERPINB10P48595 397 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 RPL34P49207 117 aaKnown RBP13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SERPINH1P50454 418 aaKnown RBP13.57□□□□□ -0.24
GABPB1-201ENST00000220429 BCAT1P54687 386 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 BCAR1P56945 870 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 TOR2AQ5JU69 321 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SLC26A9Q7LBE3 791 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 LINC00523Q86TU6 105 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 ARRDC4Q8NCT1 418 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 LRRN4Q8WUT4 740 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SEPT8Q92599 483 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 FAF2Q96CS3 445 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 RTP4Q96DX8 246 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 TMEM80Q96HE8 168 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 MARK4Q96L34 752 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 DMRTB1Q96MA1 342 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 MAGEB5Q9BZ81 275 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 CNOT6Q9ULM6 557 aaKnown RBP13.57□□□□□ -0.24
GABPB1-201ENST00000220429 TRIM38O00635 465 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 KCNN4O15554 427 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 TRIM16O95361 564 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 MYL3P08590 195 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 LCP1P13796 627 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SNX16P57768 344 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SLC10A2Q12908 348 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-201ENST00000220429 BROXQ5VW32 411 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 LIMS2Q7Z4I7 341 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 PIK3C3Q8NEB9 887 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 CENPIQ92674 756 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-201ENST00000220429 SNAPC3Q92966 411 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 ZNF670Q9BS34 389 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 IL37Q9NZH6 218 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
GABPB1-201ENST00000220429 MAGEB16A2A368 324 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 C9IYK1 514 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 E7ENX8 843 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 CTDSP2O14595 271 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 PI15O43692 258 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 FMO4P31512 558 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 UQCRC1P31930 480 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ELK3P41970 407 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ABCG1P45844 678 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ART3Q13508 389 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 IRF5Q13568 498 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms