RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 ARNTP27540 789 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 VIPR1P32241 457 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 HMGCLP35914 325 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 ETV3P41162 512 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 TPMTP51580 245 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 RALGDSQ12967 914 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 IRGCQ6NXR0 463 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 HSD11B1LQ7Z5J1 315 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FRMD1Q8N878 549 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
RTCB-201ENST00000216038 GSDMBQ8TAX9 411 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 HCAR2Q8TDS4 363 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 RLN3Q8WXF3 142 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 RANBP9Q96S59 729 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 LYSMD1Q96S90 227 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 NAT9Q9BTE0 207 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 CCDC28BQ9BUN5 200 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 STMN4Q9H169 189 aaPredicted RBP9.92□□□□□ -0.82
RTCB-201ENST00000216038 TREX1Q9NSU2 369 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 C20orf96Q9NUD7 363 aaPredicted RBP9.92□□□□□ -0.82
RTCB-201ENST00000216038 HACD3Q9P035 362 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 IL17CQ9P0M4 197 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FKBPLQ9UIM3 349 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 BLOC1S6Q9UL45 172 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 PKP3Q9Y446 797 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 SMIM23A6NLE4 172 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 CXorf49A8MYA2 514 aaPredicted RBP9.92□□□□□ -0.82
RTCB-201ENST00000216038 SNX3O60493 162 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 C1SP09871 688 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 PYGBP11216 843 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 CYP2A6P11509 494 aaPredicted RBP9.92□□□□□ -0.82
RTCB-201ENST00000216038 ACSL1P33121 698 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 KCNJ2P63252 427 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 PRAMEP78395 509 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 KRT71Q3SY84 523 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 KBTBD12Q3ZCT8 623 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 HSP90AA5PQ58FG0 334 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 STEAP4Q687X5 459 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FAM151BQ6UXP7 276 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 LIPIQ6XZB0 460 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 Q6ZVL8 140 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 DPPA4Q7L190 304 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 PTAR1Q7Z6K3 402 aaPredicted RBP9.92□□□□□ -0.82
RTCB-201ENST00000216038 SPEM1Q8N4L4 309 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FAM160A2Q8N612 972 aaPredicted RBP9.92□□□□□ -0.82
RTCB-201ENST00000216038 KLK6Q92876 244 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 SCAMP4Q969E2 229 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 TTC25Q96NG3 672 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 AGAP2Q99490 1192 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 VCX3BQ9H321 246 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 TRABDQ9H4I3 376 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FAM96AQ9H5X1 160 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FBRSQ9HAH7 460 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 RNPEPL1Q9HAU8 725 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 VCX3AQ9NNX9 186 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 SMYD2Q9NRG4 433 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 TMCO1Q9UM00 188 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 CYP8B1Q9UNU6 501 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 INVSQ9Y283 1065 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 FADS3Q9Y5Q0 445 aa9.92□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3DA0A087WVF3 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3IA0A087WXS9 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3EA0A087X179 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3KA0A087X1G2 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 CCDC162PA2VCL2 907 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3FA6NER0 549 aaPredicted RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 TMEM221A6NGB7 291 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3LB9A6J9 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 M0R296 226 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 UGT1A9O60656 530 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 GOT2P00505 430 aaKnown RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 NUDT17P0C025 328 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3HP0C7X1 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 BPIP17213 487 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 MAT2AP31153 395 aaKnown RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 SLCO1A2P46721 670 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 RPS9P46781 194 aaKnown RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 ARCN1P48444 511 aaKnown RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 CD151P48509 253 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 CDKN1CP49918 316 aaPredicted RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 ADPRHP54922 357 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 CCDC15Q0P6D6 951 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 ELP6Q0PNE2 266 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 CBLBQ13191 982 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 ACOX1Q15067 660 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 LONRF1Q17RB8 773 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 SPANXN3Q5MJ09 141 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 SEL1L3Q68CR1 1132 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 TSSK4Q6SA08 328 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 LDB1Q86U70 411 aaPredicted RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 KCNMB4Q86W47 210 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 CCNJLQ8IV13 435 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 CTAGE3PQ8IX95 158 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.91□□□□□ -0.82
RTCB-201ENST00000216038 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
RTCB-201ENST00000216038 GPR26Q8NDV2 337 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 STYXQ8WUJ0 223 aa9.91□□□□□ -0.82
RTCB-201ENST00000216038 PTCD2Q8WV60 388 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms