RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CYHR1Q6ZMK1 362 aa13.08□□□□□ -0.32
CTNS-201ENST00000046640 DCUN1D5Q9BTE7 237 aa13.08□□□□□ -0.32
CTNS-201ENST00000046640 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
CTNS-201ENST00000046640 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
CTNS-201ENST00000046640 TIMM22Q9Y584 194 aa13.08□□□□□ -0.32
CTNS-201ENST00000046640 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 IQCF5A8MTL0 148 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 SUPT3HB4E1H0 165 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 SUPT3HO75486 399 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 TRMUO75648 421 aaKnown RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 SRP72O76094 671 aaKnown RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 FGF1P05230 155 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 LINC00032P0C843 101 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 HLA-DPA1P20036 260 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 PLD1Q13393 1074 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 IKBKEQ14164 716 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 MYBPC3Q14896 1274 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 KIF19Q2TAC6 998 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 FAM45BPQ6NSW5 357 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 FAM45AQ8TCE6 357 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 AUTS2Q8WXX7 1259 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 FEM1CQ96JP0 617 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 MAELQ96JY0 434 aaKnown RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 SLC30A3Q99726 388 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 FNIP2Q9P278 1114 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 CDC7O00311 574 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 RHOCP08134 193 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 ZNF37AP17032 561 aaPredicted RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 MAPKAPK2P49137 400 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 SLC11A2P49281 568 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 ALDH7A1P49419 539 aaKnown RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 SLC7A2P52569 658 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 NR1H2P55055 460 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 HPCAP84074 193 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 SPOUT1Q5T280 376 aaKnown RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 RNF219Q5W0B1 726 aaPredicted RBP13.07□□□□□ -0.32
CTNS-201ENST00000046640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTNS-201ENST00000046640 ZBTB49Q6ZSB9 765 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 PIANPQ8IYJ0 282 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 PELI3Q8N2H9 469 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 SLCO4A1Q96BD0 722 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 TADA1Q96BN2 335 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 HSPBAP1Q96EW2 488 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 ZNF696Q9H7X3 374 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 CACNA2D2Q9NY47 1150 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 DNAJC15Q9Y5T4 150 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 V9GYQ6 96 aa13.07□□□□□ -0.32
CTNS-201ENST00000046640 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 ARHGAP10A1A4S6 786 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ZNF840PA6NDX5 716 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 A8MX80 341 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 MRASO14807 208 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 NDUFS3O75489 264 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 NDST3O95803 873 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 FDXRP22570 491 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 STT3AP46977 705 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 AGTR2P50052 363 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 STC1P52823 247 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 TWF1Q12792 350 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 TSNQ15631 228 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 PTPRNQ16849 979 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PSAPL1Q6NUJ1 521 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 LPCAT2Q7L5N7 544 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 IFNEQ86WN2 208 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CPNE9Q8IYJ1 553 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PAF1Q8N7H5 531 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 FAM47BQ8NA70 645 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CANT1Q8WVQ1 401 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CCDC126Q96EE4 140 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 GPR21Q99679 349 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 DNAAF2Q9NVR5 837 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 FKBPLQ9UIM3 349 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 NIPSNAP2O75323 286 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CDK14O94921 469 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 GNAO1P09471 354 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CDH2P19022 906 aaPredicted RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 ARL1P40616 181 aaPredicted RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 RING1Q06587 406 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CAPRIN1Q14444 709 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 GRB7Q14451 532 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ZRANB3Q5FWF4 1079 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 HMBOX1Q6NT76 420 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SLC22A9Q8IVM8 553 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CARNMT1Q8N4J0 409 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 DLG3Q92796 817 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ASB9Q96DX5 294 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CCDC68Q9H2F9 335 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 AKTIPQ9H8T0 292 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 MEAF6Q9HAF1 191 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 AGO1Q9UL18 857 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 RNF112Q9ULX5 631 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms