RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 BROXQ5VW32 411 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 C11orf88Q6PI97 169 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 ZYG11AQ6WRX3 759 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 WFIKKN2Q8TEU8 576 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 HMCESQ96FZ2 354 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 TBATAQ96M53 351 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 LMAN2LQ9H0V9 348 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 LRTM1Q9HBL6 345 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 TRPS1Q9UHF7 1281 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 SPEF2Q9C093 1822 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 PEX10O60683 326 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 ZMPSTE24O75844 475 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 ESR1P03372 595 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 CHN2P52757 468 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 GPR21Q99679 349 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 SAMD4AQ9UPU9 718 aaKnown RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 LINC00854A0A1B0GVQ3 168 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 CST1P01037 141 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 ASLP04424 464 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 XIAPP98170 497 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 SWT1Q5T5J6 900 aaKnown RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 GPR135Q8IZ08 494 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 MPP5Q8N3R9 675 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 LEMD2Q8NC56 503 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 BRSK1Q8TDC3 778 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 LENG1Q96BZ8 264 aaPredicted RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 RHOBTB2Q9BYZ6 727 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 DNAJC28Q9NX36 388 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 LGALS13Q9UHV8 139 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 MRPS17Q9Y2R5 130 aaKnown RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 CCNYL3P0C7X3 344 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 PSMD8P48556 350 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 ERVK-21P61565 698 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 TIGD2Q4W5G0 525 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 ZNF697Q5TEC3 545 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 SFRP1Q8N474 314 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 KREMEN2Q8NCW0 462 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 OR7D4Q8NG98 312 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 IKZF3Q9UKT9 509 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 ZNF490Q9ULM2 529 aaPredicted RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 MANFP55145 182 aaKnown RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 USP4Q13107 963 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 DPYSL2Q16555 572 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 FNBP1LQ5T0N5 605 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 PSRC1Q6PGN9 363 aaPredicted RBP23.06■■□□□ 1.28
TARBP1-201ENST00000040877 FAM220AQ7Z4H9 259 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 CACTIN-AS1Q8N1I8 211 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 S100A13Q99584 98 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 TCF25Q9BQ70 676 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 FNIP2Q9P278 1114 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 PCDHGA4Q9Y5G9 962 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 LYVE1Q9Y5Y7 322 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 LTN1O94822 1766 aa23.06■■□□□ 1.28
TARBP1-201ENST00000040877 KLRG2A4D1S0 409 aaPredicted RBP23.05■■□□□ 1.28
TARBP1-201ENST00000040877 TRBC1P01850 177 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 C8AP07357 584 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 PTGER3P43115 390 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 ARHGAP36Q6ZRI8 547 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 OR4A15Q8NGL6 344 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 SPOCK2Q92563 424 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 RACGAP1Q9H0H5 632 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 PNPLA8Q9NP80 782 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 SIX2Q9NPC8 291 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 TRMT13Q9NUP7 481 aaKnown RBP23.05■■□□□ 1.28
TARBP1-201ENST00000040877 CLDN9O95484 217 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 CRHR2Q13324 411 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 FAM124AQ86V42 546 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 SAMHD1Q9Y3Z3 626 aaKnown RBP23.05■■□□□ 1.28
TARBP1-201ENST00000040877 A0A0J9YYE9 177 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 LRRC72A6NJI9 287 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 SLC25A12O75746 678 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 RNASEH2AO75792 299 aaKnown RBP23.05■■□□□ 1.28
TARBP1-201ENST00000040877 LMO2P25791 158 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 GALNT13Q8IUC8 556 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 CPSF7Q8N684 471 aaKnown RBP23.05■■□□□ 1.28
TARBP1-201ENST00000040877 OR2T12Q8NG77 320 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 MYOCQ99972 504 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 FETUBQ9UGM5 382 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 TLR6Q9Y2C9 796 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 ANPEPP15144 967 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 USP46P62068 366 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 NDUFA9Q16795 377 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 ARL14EPQ8N8R7 260 aaPredicted RBP23.05■■□□□ 1.28
TARBP1-201ENST00000040877 OSBPL11Q9BXB4 747 aa23.05■■□□□ 1.28
TARBP1-201ENST00000040877 KPNA4O00629 521 aaPredicted RBP23.04■■□□□ 1.28
TARBP1-201ENST00000040877 VIPP01282 170 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 KIR3DL1P43629 444 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 SLC7A2P52569 658 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 LCP2Q13094 533 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 TBC1D21Q8IYX1 336 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 CCNB1IP1Q9NPC3 277 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 TCRBV7S2A1N4TA0A589 114 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 H7C0S8 307 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 GTPBP1O00178 669 aaKnown RBP23.04■■□□□ 1.28
TARBP1-201ENST00000040877 VNN1O95497 513 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 FGFR3P22607 806 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 GPD2P43304 727 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 ALYREFQ86V81 257 aaKnown RBP23.04■■□□□ 1.28
TARBP1-201ENST00000040877 CRYBG2Q8N1P7 616 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 ST13P5Q8NFI4 369 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms