RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 DCLRE1AQ6PJP8 1040 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 THAP5Q7Z6K1 395 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PHYKPLQ8IUZ5 450 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SLC44A5Q8NCS7 719 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 AIFM3Q96NN9 605 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NT5MQ9NPB1 228 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 MIOSQ9NXC5 875 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SPATA7Q9P0W8 599 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RPL36Q9Y3U8 105 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RHPN2P1A8MT19 583 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 AMHP03971 560 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CBLBQ13191 982 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CERCAMQ5T4B2 595 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TMC7Q7Z402 723 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF614Q8N883 585 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 KBTBD7Q8WVZ9 684 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZBED6CLQ96FA7 236 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 AGXT2Q9BYV1 514 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ALG13Q9NP73 1137 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NFASCO94856 1347 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 FAM237AA0A1B0GTK4 181 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 BTN3A1O00481 513 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CASKO14936 926 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TM7SF2O76062 418 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MSL3P1P0C860 447 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 UROSP10746 265 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 BLKP51451 505 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 IL18Q14116 193 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 RFTN1Q14699 578 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MFSD10Q14728 455 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 POU6F1Q14863 301 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 INTS6LQ5JSJ4 861 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GSPT2Q8IYD1 628 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CFAP206Q8IYR0 622 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GPATCH1Q9BRR8 931 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 RNPEPQ9H4A4 650 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 RIOX1Q9H6W3 641 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF639Q9UID6 485 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF222Q9UK12 451 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MYLKQ15746 1914 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PRDX5P30044 214 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CDC25CP30307 473 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CRATP43155 626 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 STXBP1P61764 594 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF169Q14929 603 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 EIF2S3LQ2VIR3 472 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 FUT11Q495W5 492 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SNX20Q7Z614 316 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GATAD2AQ86YP4 633 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ALLCQ8N6M5 410 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SMG7Q92540 1137 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PEX13Q92968 403 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 FAM84BQ96KN1 310 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 EPB41L1Q9H4G0 881 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 DIP2CQ9Y2E4 1556 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 A0A0G2JMP0 313 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CCNKO75909 580 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CSF1RP07333 972 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 C8BP07358 591 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 DNAJA1P31689 397 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ELK3P41970 407 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF45Q02386 682 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CTXN3Q4LDR2 81 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 OR4M2Q8NGB6 313 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 IRGQQ8WZA9 623 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CSPG4P5Q96PW8 444 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ACOX2Q99424 681 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SEPHS2Q99611 448 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 C12orf4Q9NQ89 552 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 NUP50Q9UKX7 468 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 OR10H3O60404 316 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TCEA3O75764 348 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 LTFP02788 710 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 RB1P06400 928 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 C8GP07360 202 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GIMD1P0DJR0 217 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 HGFP14210 728 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ACO1P21399 889 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PTPN9P43378 593 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SLC9B1Q4ZJI4 515 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PTCHD4Q6ZW05 846 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 KSR1Q8IVT5 923 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF606Q8WXB4 792 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 C11orf24Q96F05 449 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 FBXL21Q9UKT6 434 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ST14Q9Y5Y6 855 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 NUP188Q5SRE5 1749 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TIAM2Q8IVF5 1701 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TPST1O60507 370 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PRAMEF12O95522 483 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 YES1P07947 543 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MBL2P11226 248 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SCNN1BP51168 640 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SLC47A1Q96FL8 570 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MEPEQ9NQ76 525 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ITM2CQ9NQX7 267 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ARMCX1Q9P291 453 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SRP68Q9UHB9 627 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms