RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 TBC1D3DA0A087WVF3 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3IA0A087WXS9 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3EA0A087X179 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3KA0A087X1G2 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 IGHV1OR15-9A0A0B4J2B8 117 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3FA6NER0 549 aaPredicted RBP10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3LB9A6J9 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 WNT9AO14904 365 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PFDN6O15212 129 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 LATO43561 262 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 LZTS3O60299 673 aaPredicted RBP10.3□□□□□ -0.76
CASC19-247ENST00000641642 RPP40O75818 363 aaKnown RBP10.3□□□□□ -0.76
CASC19-247ENST00000641642 SEMA4FO95754 770 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 ABHD2P08910 425 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3HP0C7X1 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TDGF1P13385 188 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 C6P13671 934 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PPARGP37231 505 aaPredicted RBP10.3□□□□□ -0.76
CASC19-247ENST00000641642 SPAM1P38567 509 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 LIG3P49916 1009 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 METAP1P53582 386 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PMS2P54278 862 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PRAMEP78395 509 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 SGCGQ13326 291 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 ITGA9Q13797 1035 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 SEPT6Q14141 434 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 GPR33Q49SQ1 333 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3GQ6DHY5 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3CQ6IPX1 549 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 C3orf62Q6ZUJ4 267 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TECPR1Q7Z6L1 1165 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TBC1D3Q8IZP1 549 aaPredicted RBP10.3□□□□□ -0.76
CASC19-247ENST00000641642 MPP5Q8N3R9 675 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
CASC19-247ENST00000641642 DENND6BQ8NEG7 585 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 OR4K2Q8NGD2 314 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 NELL1Q92832 810 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 DTD2Q96FN9 168 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 CDKN2AIPNLQ96HQ2 116 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 COQ10AQ96MF6 247 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 TTC1Q99614 292 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PRRX2Q99811 253 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 ZSCAN5AQ9BUG6 496 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 SLC6A17Q9H1V8 727 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 FAM83DQ9H4H8 585 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 EPHX3Q9H6B9 360 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PPCSQ9HAB8 311 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 LRRC4CQ9HCJ2 640 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 PIH1D1Q9NWS0 290 aaKnown RBP10.3□□□□□ -0.76
CASC19-247ENST00000641642 C2orf42Q9NWW7 574 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 NSMCE4AQ9NXX6 385 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 MOCS1Q9NZB8 636 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 SERGEFQ9UGK8 458 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 DMTF1Q9Y222 760 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 ARL5AQ9Y689 179 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 ZDBF2Q9HCK1 2354 aa10.3□□□□□ -0.76
CASC19-247ENST00000641642 ZCWPW2A0A1B0GU75 182 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 AGAP14A8MT82 685 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 NDUFS2O75306 463 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 PRKCGP05129 697 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 C1SP09871 688 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 PIRTP0C851 137 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 MYBL2P10244 700 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 STX2P32856 288 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 ACSL1P33121 698 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 FOXK2Q01167 660 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 NAB1Q13506 487 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 CRYMQ14894 314 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 ACOX1Q15067 660 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 LONRF1Q17RB8 773 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 KCTD19Q17RG1 926 aaPredicted RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 ZNF284Q2VY69 593 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 SETMARQ53H47 684 aaPredicted RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 AARS2Q5JTZ9 985 aaKnown RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 LYPLAL1Q5VWZ2 237 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 DENND2CQ68D51 928 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 AFTPHQ6ULP2 937 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 CERS6Q6ZMG9 384 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 UNC5AQ6ZN44 842 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 KIAA0408Q6ZU52 694 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 GALNT7Q86SF2 657 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 TSPAN33Q86UF1 283 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 AGGF1Q8N302 714 aaeCLIP10.29□□□□□ -0.76
CASC19-247ENST00000641642 TRAM1L1Q8N609 369 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 OR13J1Q8NGT2 312 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 GPR150Q8NGU9 434 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 HEXDCQ8WVB3 486 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 CDKL2Q92772 493 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.29□□□□□ -0.76
CASC19-247ENST00000641642 ZNF669Q96BR6 464 aaPredicted RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 EID2BQ96D98 161 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 MFSD3Q96ES6 412 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 TOE1Q96GM8 510 aaKnown RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 TCF12Q99081 682 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 SLC17A9Q9BYT1 436 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 CDC42EP4Q9H3Q1 356 aaKnown RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
CASC19-247ENST00000641642 FETUBQ9UGM5 382 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 CHMP2BQ9UQN3 213 aa10.29□□□□□ -0.76
CASC19-247ENST00000641642 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms