RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TLE2Q04725 743 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 STX5Q13190 355 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 FLOT2Q14254 428 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 LRRC36Q1X8D7 754 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 CNKSR3Q6P9H4 555 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 TMCO2Q7Z6W1 182 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-211ENST00000641213 TTC30BQ8N4P2 665 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 RNF148Q8N7C7 305 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 ADAMTS19Q8TE59 1207 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 GDPD5Q8WTR4 605 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 ZNF558Q96NG5 402 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 CCDC167Q9P0B6 97 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 RNF112Q9ULX5 631 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 VPS9D1Q9Y2B5 631 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 A0A0U1RQS6 177 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 SUPT3HB4E1H0 165 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 STX7O15400 261 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 OR1I1O60431 355 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 GREM1O60565 184 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 CLASP2O75122 1294 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 SUPT3HO75486 399 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 LATS1O95835 1130 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 TTPAP49638 278 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 VEGFBP49765 207 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 INO80DQ53TQ3 878 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 PDSS2Q86YH6 399 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 AUTS2Q8WXX7 1259 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 SLC30A3Q99726 388 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 FBRSL1Q9HCM7 1045 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ZNF334Q9HCZ1 680 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 PCDHGA7Q9Y5G6 932 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 OR51B4Q9Y5P0 310 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 CDC7O00311 574 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 CASQ2O14958 399 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 AZIN1O14977 448 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ECI2O75521 394 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 PKMP14618 531 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 HDCP19113 662 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 PEX2P28328 305 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 FOXA1P55317 472 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 RHOAP61586 193 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ZXDBP98169 803 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 LRP8Q14114 963 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 TSNQ15631 228 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 TRIM60Q495X7 471 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 KANK2Q63ZY3 851 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 REP15Q6BDI9 236 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 TMEM154Q6P9G4 183 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 FBXO39Q8N4B4 442 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ARL14EPQ8N8R7 260 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 SNX31Q8N9S9 440 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 HJURPQ8NCD3 748 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ZNF689Q96CS4 500 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 KLHL4Q9C0H6 718 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 VCX3BQ9H321 246 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 AKTIPQ9H8T0 292 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 CACNA2D2Q9NY47 1150 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 PSMD13Q9UNM6 376 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 FNDC3AQ9Y2H6 1198 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 FCF1Q9Y324 198 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 INSL5Q9Y5Q6 135 aa16.98■□□□□ 0.31
PHGDH-211ENST00000641213 ZNF106Q9H2Y7 1883 aaKnown RBP16.98■□□□□ 0.31
PHGDH-211ENST00000641213 VPS26AO75436 327 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 PYGLP06737 847 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 ALDOCP09972 364 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 EEF1DP29692 281 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 ATP4BP51164 291 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 EPHB3P54753 998 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 PSME3P61289 254 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 MMEL1Q495T6 779 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 SFT2D3Q587I9 215 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 CTSL3PQ5NE16 218 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 FAM117BQ6P1L5 589 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 TCEAL8Q8IYN2 117 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 NKAPQ8N5F7 415 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 PCDH20Q8N6Y1 951 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 WFDC5Q8TCV5 224 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 TRPC4APQ8TEL6 797 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 TWIST2Q8WVJ9 160 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 GATA6Q92908 595 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 TOP1MTQ969P6 601 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 FUBP1Q96AE4 644 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 RNF208Q9H0X6 261 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 ZDHHC7Q9NXF8 308 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 BCAP29Q9UHQ4 241 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 VPS51Q9UID3 782 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 PTGDR2Q9Y5Y4 395 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 NPEPPSL1A6NEC2 478 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 H7C0S8 307 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 GFRA2O00451 464 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 PFDN6O15212 129 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 FZD6O60353 706 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 NIPSNAP2O75323 286 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 BCAS2O75934 225 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 SNRPB2P08579 225 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 CD9P21926 228 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 CSKP41240 450 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 CLCQ05315 142 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms