RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 DKK3Q9UBP4 350 aa18.16■□□□□ 0.5
PHGDH-209ENST00000641074 VPS9D1Q9Y2B5 631 aa18.16■□□□□ 0.5
PHGDH-209ENST00000641074 STARD13Q9Y3M8 1113 aa18.16■□□□□ 0.5
PHGDH-209ENST00000641074 GLYATL1P3A0A0U1RQE8 302 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 UPK3BL1B0FP48 263 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 UPK3BL2E5RIL1 263 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 ANHXE9PGG2 379 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 PFDN6O15212 129 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 C1SP09871 688 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SBK3P0C264 359 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 CA5AP35218 305 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 GRIA2P42262 883 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SOX9P48436 509 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SUOXP51687 545 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 BST1Q10588 318 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 NFATC2Q13469 925 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 CSHL1Q14406 222 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 LRRC8EQ6NSJ5 796 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SERPINA13PQ6UXR4 307 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 RFLNAQ6ZTI6 216 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SPATA21Q7Z572 469 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SNX20Q7Z614 316 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 RAB3IL1Q8TBN0 382 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 HCAR2Q8TDS4 363 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 HEXDCQ8WVB3 486 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 ANKRD49Q8WVL7 239 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 PBXIP1Q96AQ6 731 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 GRAMD1AQ96CP6 724 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SCYL1Q96KG9 808 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 UBXN10Q96LJ8 280 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 TSSK1BQ9BXA7 367 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 ASB8Q9H765 288 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 FBRSL1Q9HCM7 1045 aaKnown RBP18.15■□□□□ 0.5
PHGDH-209ENST00000641074 PCDH12Q9NPG4 1184 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 ZDHHC4Q9NPG8 344 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 CD207Q9UJ71 328 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 SARDHQ9UL12 918 aa18.15■□□□□ 0.5
PHGDH-209ENST00000641074 ZNF106Q9H2Y7 1883 aaKnown RBP18.15■□□□□ 0.5
PHGDH-209ENST00000641074 GOLGA8CPA6NN73 597 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 C16orf96A6NNT2 1141 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 H3BQ06 376 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-209ENST00000641074 TK2O00142 265 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 EBAG9O00559 213 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 APOA4P06727 396 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 CCDC166P0CW27 439 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 FGF3P11487 239 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-209ENST00000641074 CHRNA6Q15825 494 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 TSNAXIP1Q2TAA8 658 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 ATG16L1Q676U5 607 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 CERS6Q6ZMG9 384 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 ZCCHC23Q6ZST2 131 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 TTC7BQ86TV6 843 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 CCDC197Q8NCU1 140 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 FAM136AQ96C01 138 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 THAP10Q9P2Z0 257 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-209ENST00000641074 MED16Q9Y2X0 877 aa18.14■□□□□ 0.5
PHGDH-209ENST00000641074 KPNA3O00505 521 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-209ENST00000641074 PRNPP04156 253 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 LTA4HP09960 611 aaKnown RBP18.14■□□□□ 0.49
PHGDH-209ENST00000641074 CYP2A6P11509 494 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-209ENST00000641074 UGT1A6P19224 532 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 ITGALP20701 1170 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 UGT1A1P22309 533 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 UGT1A4P22310 534 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 VIPR1P32241 457 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 UGT1A3P35503 534 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 UGT1A5P35504 534 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 IL12RB1P42701 662 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 PTGER3P43115 390 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 PTPN5P54829 565 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 FAM83EQ2M2I3 478 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 CCDC91Q7Z6B0 441 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 SERPINA9Q86WD7 417 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 OR8D1Q8WZ84 308 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.14■□□□□ 0.492e-7■■■■■ 60.5
PHGDH-209ENST00000641074 THOC1Q96FV9 657 aaKnown RBP18.14■□□□□ 0.49
PHGDH-209ENST00000641074 FAM161BQ96MY7 647 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 ACOX2Q99424 681 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 CCDC68Q9H2F9 335 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 POPDC3Q9HBV1 291 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 XPR1Q9UBH6 696 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 PPM1HQ9ULR3 514 aa18.14■□□□□ 0.49
PHGDH-209ENST00000641074 TCF20Q9UGU0 1960 aaKnown RBP18.14■□□□□ 0.49
PHGDH-209ENST00000641074 TRBV5-4A0A0C4DH59 114 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 TARM1B6A8C7 271 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 RHOBTB1O94844 696 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 APODP05090 189 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 PKMP14618 531 aaKnown RBP18.13■□□□□ 0.49
PHGDH-209ENST00000641074 SLC26A3P40879 764 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 SPINT3P49223 89 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 RGS19P49795 217 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 METAP1P53582 386 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 ADARP55265 1226 aaKnown RBP18.13■□□□□ 0.49
PHGDH-209ENST00000641074 STX3Q13277 289 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 ARHGEF7Q14155 803 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 ELAVL3Q14576 367 aaKnown RBP18.13■□□□□ 0.49
PHGDH-209ENST00000641074 PREPLQ4J6C6 727 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-209ENST00000641074 SETMARQ53H47 684 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-209ENST00000641074 CTSL3PQ5NE16 218 aa18.13■□□□□ 0.49
PHGDH-209ENST00000641074 EGFLAMQ63HQ2 1017 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms