RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 INPP4BO15327 924 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 TNFSF14O43557 240 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 BUD23O43709 281 aaKnown RBP26.54■■□□□ 1.84
VEGFA-231ENST00000640499 RASGRP1O95267 797 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 IFNB1P01574 187 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 MYF5P13349 255 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 RPL22P35268 128 aaKnown RBP26.54■■□□□ 1.84
VEGFA-231ENST00000640499 DCDC1P59894 354 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 ALS2CLQ60I27 953 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 TTC27Q6P3X3 843 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 C17orf53Q8N3J3 647 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-231ENST00000640499 MAIP1Q8WWC4 291 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 HIC2Q96JB3 615 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 CNDP2Q96KP4 475 aaKnown RBP26.54■■□□□ 1.84
VEGFA-231ENST00000640499 PPP1R2P1Q96PQ5 205 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 SLC13A1Q9BZW2 595 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 TMPRSS11EQ9UL52 423 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 WASF3Q9UPY6 502 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 TMEM98Q9Y2Y6 226 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 PCYT1BQ9Y5K3 369 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-231ENST00000640499 OAS3Q9Y6K5 1087 aaKnown RBP26.54■■□□□ 1.84
VEGFA-231ENST00000640499 U3KQA8 63 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 YY2O15391 372 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 LDOC1O95751 146 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-231ENST00000640499 TOP3BO95985 862 aaKnown RBP26.53■■□□□ 1.84
VEGFA-231ENST00000640499 FTH1P19P0C7X4 201 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 CA5AP35218 305 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 DNAJC3Q13217 504 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 TCEA2Q15560 299 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 DEFB133Q30KQ1 61 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 INAVAQ3KP66 663 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 PNPLA1Q8N8W4 532 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 ATL2Q8NHH9 583 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 SCARF2Q96GP6 870 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-231ENST00000640499 AP1M1Q9BXS5 423 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 CYP4F12Q9HCS2 524 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 NLGN3Q9NZ94 848 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 HACD3Q9P035 362 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 FTSJ1Q9UET6 329 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 KCTD3Q9Y597 815 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 ST14Q9Y5Y6 855 aa26.53■■□□□ 1.84
VEGFA-231ENST00000640499 PRSS38A1L453 326 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 PDE2AO00408 941 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-231ENST00000640499 GAPDHSO14556 408 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-231ENST00000640499 AP2A1O95782 977 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 TNFP01375 233 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 KELP23276 732 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 MYLKQ15746 1914 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 CCL4L1Q8NHW4 92 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 TMEM168Q9H0V1 697 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 IL26Q9NPH9 171 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 KCND1Q9NSA2 647 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 ARL5AQ9Y689 179 aa26.52■■□□□ 1.84
VEGFA-231ENST00000640499 NEMP2A6NFY4 417 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 LMO7DNF2Z398 122 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 PYGLP06737 847 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 BLKP51451 505 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 GNG11P61952 73 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 GLT6D1Q7Z4J2 308 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 TRAM1L1Q8N609 369 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 ACTRT1Q8TDG2 376 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 CDH19Q9H159 772 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 SUFUQ9UMX1 484 aa26.51■■□□□ 1.83
VEGFA-231ENST00000640499 BPTFQ12830 3046 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 TPP1O14773 563 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 TPH1P17752 444 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 MSNP26038 577 aaKnown RBP26.5■■□□□ 1.83
VEGFA-231ENST00000640499 PMLP29590 882 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 GRIA1P42261 906 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 TNNT3P45378 269 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-231ENST00000640499 ZNF648Q5T619 568 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-231ENST00000640499 DOK6Q6PKX4 331 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 FAM181AQ8N9Y4 354 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 APOLD1Q96LR9 279 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 PLEKHG4BQ96PX9 1271 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 SPATA16Q9BXB7 569 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 LRRC40Q9H9A6 602 aa26.5■■□□□ 1.83
VEGFA-231ENST00000640499 PIH1D1Q9NWS0 290 aaKnown RBP26.5■■□□□ 1.83
VEGFA-231ENST00000640499 CES2O00748 559 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 IVLP07476 585 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 ACADVLP49748 655 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 SEMA5AQ13591 1074 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 TAF1AQ15573 450 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-231ENST00000640499 CYP1B1Q16678 543 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 PAPD7Q5XG87 772 aaKnown RBP26.49■■□□□ 1.83
VEGFA-231ENST00000640499 NRROSQ86YC3 692 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 FSTL5Q8N475 847 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-231ENST00000640499 BRSK1Q8TDC3 778 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 CARS2Q9HA77 564 aaKnown RBP26.49■■□□□ 1.83
VEGFA-231ENST00000640499 ARFGAP3Q9NP61 516 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 RAD18Q9NS91 495 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 HOMER3Q9NSC5 361 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 MOSPD1Q9UJG1 213 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 PLEKHM1Q9Y4G2 1056 aa26.49■■□□□ 1.83
VEGFA-231ENST00000640499 PGRMC1O00264 195 aaKnown RBP26.48■■□□□ 1.83
VEGFA-231ENST00000640499 PSMD3O43242 534 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 LDB2O43679 373 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 DNAJC6O75061 913 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 SUN1O94901 812 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 CTSEP14091 401 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms