RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 AGERQ15109 404 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 UGP2Q16851 508 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 ALG11Q2TAA5 492 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 TTMPQ5BVD1 217 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 ZFYVE27Q5T4F4 411 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 ERAP2Q6P179 960 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 INO80CQ6PI98 192 aaPredicted RBP12.65□□□□□ -0.38
CTSD-208ENST00000636843 BRAT1Q6PJG6 821 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 SPOCD1Q6ZMY3 1216 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 NETO2Q8NC67 525 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 OR6C4Q8NGE1 309 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 TTC9Q92623 222 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 TSACCQ96A04 125 aaPredicted RBP12.65□□□□□ -0.38
CTSD-208ENST00000636843 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
CTSD-208ENST00000636843 ARL8AQ96BM9 186 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 ZBTB9Q96C00 473 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 LIN37Q96GY3 246 aaPredicted RBP12.65□□□□□ -0.38
CTSD-208ENST00000636843 CNPY3Q9BT09 278 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 APOOQ9BUR5 198 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 PCDH12Q9NPG4 1184 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 GULP1Q9UBP9 304 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 UBA2Q9UBT2 640 aaPredicted RBP12.65□□□□□ -0.38
CTSD-208ENST00000636843 COQ6Q9Y2Z9 468 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 NFS1Q9Y697 457 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 ZNF462Q96JM2 2506 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 COL6A6A6NMZ7 2263 aa12.65□□□□□ -0.38
CTSD-208ENST00000636843 CFAP46Q8IYW2 2715 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 FLNBO75369 2602 aaKnown RBP12.64□□□□□ -0.39
CTSD-208ENST00000636843 PIGNO95427 931 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 KRT14P02533 472 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 MYZAPP0CAP1 466 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 C6P13671 934 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 CSNK1DP48730 415 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 NDST2P52849 883 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 PDX1P52945 283 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 PMS2P54278 862 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 SRP54P61011 504 aaKnown RBP12.64□□□□□ -0.39
CTSD-208ENST00000636843 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
CTSD-208ENST00000636843 SNX1Q13596 522 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 TFDP3Q5H9I0 405 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 FOXR1Q6PIV2 292 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 ENPP7Q6UWV6 458 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 CROCCP2Q86T23 111 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 KYQ8NBH2 561 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 SNF8Q96H20 258 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 ATP6V1G3Q96LB4 118 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 HEMGNQ9BXL5 484 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 FRMD8P1Q9BZ68 369 aaPredicted RBP12.64□□□□□ -0.39
CTSD-208ENST00000636843 SYNDIG1Q9H7V2 258 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 ASIC3Q9UHC3 531 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 GPR34Q9UPC5 381 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 ATP8A1Q9Y2Q0 1164 aa12.64□□□□□ -0.39
CTSD-208ENST00000636843 hCG_1818297A0A087WSY0 165 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 CFAP69A5D8W1 941 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 NDC80O14777 642 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 PLD2O14939 933 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 PRAMEF11O60813 436 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 RNF8O76064 485 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 ZIC2O95409 532 aaPredicted RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 CELA2BP08218 269 aaPredicted RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 NUDT17P0C025 328 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 MMP12P39900 470 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 SLC25A11Q02978 314 aaKnown RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 MTM1Q13496 603 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 INPP5AQ14642 412 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 AGBL2Q5U5Z8 902 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 MFSD7Q6UXD7 560 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 CCDC89Q8N998 374 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 CCDC74AQ96AQ1 378 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 EXOC2Q96KP1 924 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 WDR92Q96MX6 357 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 GFM1Q96RP9 751 aaKnown RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 STRADBQ9C0K7 418 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 SIRPGQ9P1W8 387 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 KLQ9UEF7 1012 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 DRG1Q9Y295 367 aaKnown RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 R3HDM2Q9Y2K5 976 aaKnown RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 PCDHGA7Q9Y5G6 932 aa12.63□□□□□ -0.39
CTSD-208ENST00000636843 COL27A1Q8IZC6 1860 aaPredicted RBP12.63□□□□□ -0.39
CTSD-208ENST00000636843 PMS2P1A4D2B8 440 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ARHGAP42A6NI28 874 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 D6RAR5 112 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 J3QKU1 62 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 LRCH4O75427 683 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TNFP01375 233 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TCF4P15884 667 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 PCK1P35558 622 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CDKN2BP42772 138 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 LIG3P49916 1009 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TPI1P60174 286 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CCL7P80098 99 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ZNF844Q08AG5 666 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms