RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF20P17024 532 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 FXR1P51114 621 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 MRPL49Q13405 166 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 UAP1L1Q3KQV9 507 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TNFAIP8L3Q5GJ75 292 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SYCE2Q6PIF2 218 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ZPBP2Q6X784 338 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 UBE2R2Q712K3 238 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SLC29A4Q7RTT9 530 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 WNT8BQ93098 351 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CNTNAP5Q8WYK1 1306 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TRPM1Q7Z4N2 1603 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TTLL8A6PVC2 850 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 B3GALT2O43825 422 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CD2P06729 351 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 FSHRP23945 695 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ADSSP30520 456 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 MLLT3P42568 568 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 RPS9P46781 194 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 RPL14P50914 215 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CHAF1BQ13112 559 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 RRP1BQ14684 758 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SLC22A15Q8IZD6 547 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TNFAIP8L1Q8WVP5 186 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 WDR24Q96S15 920 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DPYSL5Q9BPU6 564 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 MRPL57Q9BQC6 102 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CDC42EP4Q9H3Q1 356 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TMPRSS4Q9NRS4 437 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 PCDH10Q9P2E7 1040 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ATPIF1Q9UII2 106 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CNTNAP4Q9C0A0 1308 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 PDCD5O14737 125 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 UGT2B11O75310 529 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 REM1O75628 298 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TRAPPC6AO75865 159 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ARP10275 920 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SDC2P34741 201 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 HCAR3P49019 387 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SEC13P55735 322 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ACTR1AP61163 376 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 PSME3P61289 254 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 RPL38P63173 70 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 PPP3CAQ08209 521 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 BNIP1Q12981 228 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ZBTB6Q15916 424 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 GFOD2Q3B7J2 385 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 EPHA10Q5JZY3 1008 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 AAGABQ6PD74 315 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ARHGAP36Q6ZRI8 547 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 LRRC34Q8IZ02 419 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DAGLBQ8NCG7 672 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ACTL9Q8TC94 416 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SCGB3A2Q96PL1 93 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 BTBD10Q9BSF8 475 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DDX18Q9NVP1 670 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CALML5Q9NZT1 146 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 MYH6P13533 1939 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 WFS1O76024 890 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SEC24AO95486 1093 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 C9P02748 559 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 NR2C1P13056 603 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 MPP2Q14168 576 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 EIPR1Q53HC9 387 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CXCL17Q6UXB2 119 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SLC43A3Q8NBI5 491 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 BHLHE22Q8NFJ8 381 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ACTRT1Q8TDG2 376 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CDRT15Q96T59 188 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 COPS8Q99627 209 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SPAG4Q9NPE6 437 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 AGO1Q9UL18 857 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 WBP11Q9Y2W2 641 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CLTCQ00610 1675 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 MYH7P12883 1935 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM150CB9EJG8 249 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 KCNK1O00180 336 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DDNO94850 711 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 IRF2P14316 349 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ITIH1P19827 911 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DRD4P21917 467 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 PCDH1Q08174 1060 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 DCST1Q5T197 706 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ADNP2Q6IQ32 1131 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CXorf57Q6NSI4 855 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 CES3Q6UWW8 571 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 FAM151BQ6UXP7 276 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TSHZ1Q6ZSZ6 1077 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 AVL9Q8NBF6 648 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ZSWIM2Q8NEG5 633 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 GTPBP2Q9BX10 602 aaKnown RBP5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ULBP1Q9BZM6 244 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 IL1RAPQ9NPH3 570 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 TRPV5Q9NQA5 729 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 SAMD9LQ8IVG5 1584 aa5.54□□□□□ -1.52
SCN1A-209ENST00000635750 ERVK-7P63135 1459 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms