RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CAPN9O14815 690 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 PAGE4O60829 102 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SEC14L2O76054 403 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 MLYCDO95822 493 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 TBX18O95935 607 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 CRYAAP02489 173 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SPARCP09486 303 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 ZNF182P17025 639 aaPredicted RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 DDX5P17844 614 aaKnown RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 RRM1P23921 792 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 MCM3P25205 808 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 USP8P40818 1118 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 RAD23BP54727 409 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 PDE1BQ01064 536 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 FOXM1Q08050 763 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 FOXD4Q12950 439 aaPredicted RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 ALFQ53S48 1182 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 JAKMIP3Q5VZ66 844 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 FRG2Q64ET8 278 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SIGIRRQ6IA17 410 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 CYP20A1Q6UW02 462 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 GDPD4Q6W3E5 623 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 DSTYKQ6XUX3 929 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 DIS3L2Q8IYB7 885 aaKnown RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 RNF113BQ8IZP6 322 aaKnown RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 LMNTD1Q8N9Z9 388 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 PCYOX1LQ8NBM8 494 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 TMEM116Q8NCL8 245 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 OR13A1Q8NGR1 328 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SLC44A1Q8WWI5 657 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 APBB2Q92870 758 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SMARCE1Q969G3 411 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 ALG14Q96F25 216 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 ZNF583Q96ND8 569 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 EPYCQ99645 322 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 STRA6Q9BX79 667 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SLC26A6Q9BXS9 759 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 MMP28Q9H239 520 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 RANBP17Q9H2T7 1088 aaKnown RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 PIGMQ9H3S5 423 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 TMEM30AQ9NV96 361 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 CNOT8Q9UFF9 292 aaKnown RBP2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 KLHL20Q9Y2M5 609 aa2.36□□□□□ -2.03
SCARNA4-201ENST00000629045 SMCHD1A6NHR9 2005 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 ASPDHA6ND91 283 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 GOLGA6L9A6NEM1 432 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 P2RY10O00398 339 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 SPINT2O43291 252 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 KRT86O43790 486 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 SLC22A3O75751 556 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 RTN3O95197 1032 aaPredicted RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 ATP1A1P05023 1023 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 CLEC3BP05452 202 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 POLR2CP19387 275 aaPredicted RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 TCEA1P23193 301 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 IL15P40933 162 aaPredicted RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 APOBEC1P41238 236 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 FMO5P49326 533 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 CLDN20P56880 219 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 RPS3AP61247 264 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 RPL7AP62424 266 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 COG7P83436 770 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 RUNX1T1Q06455 604 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 CDC16Q13042 620 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 OLIG2Q13516 323 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 KRT81Q14533 505 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 MED22Q15528 200 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 KRT24Q2M2I5 525 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 DPCR1Q3MIW9 517 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 INTS11Q5TA45 600 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 BRAT1Q6PJG6 821 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 ASB18Q6ZVZ8 466 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 KCTD8Q6ZWB6 473 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 MARK2Q7KZI7 788 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 CPLX4Q7Z7G2 160 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 TMPRSS12Q86WS5 348 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 KMT5CQ86Y97 462 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 NRROSQ86YC3 692 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 DCUN1D3Q8IWE4 304 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 NAXEQ8NCW5 288 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 SLC24A4Q8NFF2 622 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 LRRC8CQ8TDW0 803 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 NR4A3Q92570 626 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 ARHGEF26Q96DR7 871 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 CDCA5Q96FF9 252 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 PPM1MQ96MI6 270 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 UHRF2Q96PU4 802 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 SMC6Q96SB8 1091 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 SYT17Q9BSW7 474 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 JMJD4Q9H9V9 463 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 FBRSL1Q9HCM7 1045 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 RANGRFQ9HD47 186 aaPredicted RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 LIMA1Q9UHB6 759 aaKnown RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 PGAP2Q9UHJ9 254 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 FAF1Q9UNN5 650 aaPredicted RBP2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 DLGAP4Q9Y2H0 992 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 ADAM18Q9Y3Q7 739 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 CLIC4Q9Y696 253 aa2.35□□□□□ -2.03
SCARNA4-201ENST00000629045 KCNE2Q9Y6J6 123 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms