RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CHMP5Q9NZZ3 219 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 AKAP7Q9P0M2 348 aaPredicted RBP10.98□□□□□ -0.65
DDX41-218ENST00000625286 TBC1D29Q9UFV1 150 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 OAS3Q9Y6K5 1087 aaKnown RBP10.98□□□□□ -0.65
DDX41-218ENST00000625286 ICE1Q9Y2F5 2266 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 A6NCN8 305 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 LRRC53A6NM62 1247 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 INPP4BO15327 924 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 MAP3K6O95382 1288 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 ATP1A1P05023 1023 aaKnown RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 RARAP10276 462 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 PRKAR1AP10644 381 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 CYP2A6P11509 494 aaPredicted RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 F8A1P23610 371 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 CASRP41180 1078 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 GPR1P46091 355 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 UBAP2LQ14157 1087 aaKnown RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 ZNF235Q14590 738 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 SNAP47Q5SQN1 464 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 DCAF12Q5T6F0 453 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 IYDQ6PHW0 289 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 LZTR1Q8N653 840 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 TEX26Q8N6G2 289 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 LRRN4Q8WUT4 740 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 AP2M1Q96CW1 435 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 RIOK2Q9BVS4 552 aaKnown RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 ASPSCR1Q9BZE9 553 aa10.97□□□□□ -0.65
DDX41-218ENST00000625286 CNOT8Q9UFF9 292 aaKnown RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 MRPS18BQ9Y676 258 aaKnown RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 SPTBN1Q01082 2364 aaKnown RBP10.97□□□□□ -0.65
DDX41-218ENST00000625286 NOTCH2Q04721 2471 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 A0A0J9YYE9 177 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 A0A1W2PQ67 120 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 ZNF891A8MT65 544 aaPredicted RBP10.96□□□□□ -0.65
DDX41-218ENST00000625286 RNF8O76064 485 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 CLDN7O95471 211 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 TRBC1P01850 177 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 TPM2P07951 284 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 CD48P09326 243 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 PCK1P35558 622 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 HSPA9P38646 679 aaKnown RBP10.96□□□□□ -0.65
DDX41-218ENST00000625286 MMP13P45452 471 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 CCR10P46092 362 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 STC1P52823 247 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 GPLD1P80108 840 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 NFATC2Q13469 925 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 ARMC12Q5T9G4 340 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 MARC1Q5VT66 337 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 WDR74Q6RFH5 385 aaPredicted RBP10.96□□□□□ -0.65
DDX41-218ENST00000625286 TMCO3Q6UWJ1 677 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 NLRP8Q86W28 1048 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 CPNE8Q86YQ8 564 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 NRSN1Q8IZ57 195 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.96□□□□□ -0.65
DDX41-218ENST00000625286 HSPH1Q92598 858 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 ABHD17AQ96GS6 310 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 BTBD6Q96KE9 485 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 ZWILCHQ9H900 591 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 PCDH18Q9HCL0 1135 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 NT5MQ9NPB1 228 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 FBXO8Q9NRD0 319 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 KCTD5Q9NXV2 234 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 OGFRQ9NZT2 677 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
DDX41-218ENST00000625286 RP1L1Q8IWN7 2480 aaPredicted RBP10.96□□□□□ -0.66
DDX41-218ENST00000625286 PRRC2CQ9Y520 2896 aaKnown RBP10.95□□□□□ -0.66
DDX41-218ENST00000625286 FADS2P1A8MWK0 482 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 H3BRJ5 948 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 ZW10O43264 779 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 DLGAP3O95886 979 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 FURINP09958 794 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 GZMAP12544 262 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 SKILP12757 684 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 ZNF28P17035 718 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 NR1D1P20393 614 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 MYL5Q02045 173 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 DSC2Q02487 901 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 NIPAL4Q0D2K0 466 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 CDC20Q12834 499 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 BIRC2Q13490 618 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 DEFB109BQ30KR1 87 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 ZNF648Q5T619 568 aaPredicted RBP10.95□□□□□ -0.66
DDX41-218ENST00000625286 CLEC17AQ6ZS10 378 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 USP45Q70EL2 814 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 CHST15Q7LFX5 561 aaPredicted RBP10.95□□□□□ -0.66
DDX41-218ENST00000625286 NLGN4XQ8N0W4 816 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 NLGN4YQ8NFZ3 816 aaPredicted RBP10.95□□□□□ -0.66
DDX41-218ENST00000625286 EXD1Q8NHP7 514 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 ARRDC2Q8TBH0 407 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 NCSTNQ92542 709 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 EID2BQ96D98 161 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 SLC38A3Q99624 504 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 DPYSL5Q9BPU6 564 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 TBC1D10AQ9BXI6 508 aa10.95□□□□□ -0.66
DDX41-218ENST00000625286 GPN2Q9H9Y4 310 aaPredicted RBP10.95□□□□□ -0.66
DDX41-218ENST00000625286 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
DDX41-218ENST00000625286 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDX41-218ENST00000625286 SIDT1Q9NXL6 827 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms