RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 FAM50BQ9Y247 325 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.17□□□□□ -0.3
C3orf56-201ENST00000624688 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
C3orf56-201ENST00000624688 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 A8MUI8 341 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 ENO1P06733 434 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PKMP14618 531 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CD9P21926 228 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SERPINB5P36952 375 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 HK2P52789 917 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 ADARP55265 1226 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 ECT2LQ008S8 904 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 DMC1Q14565 340 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CARD16Q5EG05 197 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 DPY19L3Q6ZPD9 716 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SLC22A9Q8IVM8 553 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PCDH20Q8N6Y1 951 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 KDM1BQ8NB78 822 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 RSPRY1Q96DX4 576 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CCDC97Q96F63 343 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 LYSMD1Q96S90 227 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 GPR21Q99679 349 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CPEB1Q9BZB8 566 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 STK38LQ9Y2H1 464 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PPIL1Q9Y3C6 166 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 NPIPB15A6NHN6 443 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 F8W8V4 182 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 HDAC3O15379 428 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 NIPSNAP2O75323 286 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PAPLNO95428 1278 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 ESRRAP11474 423 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 MTHFD2P13995 350 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 AOC1P19801 751 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 IMPDH1P20839 514 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PTGER3P43115 390 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CCNHP51946 323 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 NFKB2Q00653 900 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SHHQ15465 462 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 TBCCQ15814 346 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 AARS2Q5JTZ9 985 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 RPS27LQ71UM5 84 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 TSPAN33Q86UF1 283 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 LONP2Q86WA8 852 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 NAT16Q8N8M0 369 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 GIMAP7Q8NHV1 300 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 RHEBL1Q8TAI7 183 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 PHF21BQ96EK2 531 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 L3HYPDHQ96EM0 354 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 OR52B2Q96RD2 323 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 BTBD10Q9BSF8 475 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 DERL2Q9GZP9 239 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CCDC68Q9H2F9 335 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 GSTO2Q9H4Y5 243 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SUV39H2Q9H5I1 410 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 TFB2MQ9H5Q4 396 aaKnown RBP13.16□□□□□ -0.3
C3orf56-201ENST00000624688 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SYTL2Q9HCH5 934 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 TNFRSF12AQ9NP84 129 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 SLC30A1Q9Y6M5 507 aa13.16□□□□□ -0.3
C3orf56-201ENST00000624688 A8MX80 341 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 TMEM233B4DJY2 109 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 PFDN6O15212 129 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 BNIP3LO60238 219 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 SNUPNO95149 360 aaKnown RBP13.15□□□□□ -0.3
C3orf56-201ENST00000624688 TSPAN12O95859 305 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 JUNP05412 331 aaKnown RBP13.15□□□□□ -0.3
C3orf56-201ENST00000624688 BPIP17213 487 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 CPA2P48052 419 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 RIPK1Q13546 671 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 GEN1Q17RS7 908 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 ZNF678Q5SXM1 525 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 SEL1L3Q68CR1 1132 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 CRTC1Q6UUV9 634 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 FAM151BQ6UXP7 276 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 FRMD7Q6ZUT3 714 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 Q6ZVU0 165 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 CELF5Q8N6W0 485 aaKnown RBP13.15□□□□□ -0.3
C3orf56-201ENST00000624688 ZNF557Q8N988 423 aaPredicted RBP13.15□□□□□ -0.3
C3orf56-201ENST00000624688 SIDT2Q8NBJ9 832 aaKnown RBP13.15□□□□□ -0.3
C3orf56-201ENST00000624688 VN1R2Q8NFZ6 395 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 STON2Q8WXE9 905 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 KIAA1191Q96A73 305 aa13.15□□□□□ -0.3
C3orf56-201ENST00000624688 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms