RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZNF395Q9H8N7 513 aaPredicted RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 TCF7L2Q9NQB0 619 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 PFDN4Q9NQP4 134 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 OBP2AQ9NY56 170 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 KLHL42Q9P2K6 505 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 GNPTGQ9UJJ9 305 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 CDYLQ9Y232 598 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 HCFC2Q9Y5Z7 792 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 C1orf232A0A0U1RR37 186 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 E5RI56 91 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 K7ERQ8 282 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 SCAMP3O14828 347 aaKnown RBP16.27■□□□□ 0.2
LDB3-208ENST00000623007 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
LDB3-208ENST00000623007 CBX6O95503 412 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 SLC4A1P02730 911 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 SPAM1P38567 509 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 IL2P60568 153 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 HERVK_113P63132 956 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 XIAPP98170 497 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 PEX6Q13608 980 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 CAMK1Q14012 370 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 SEMA3AQ14563 771 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 FUT11Q495W5 492 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 LYSMD3Q7Z3D4 306 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 GRASPQ7Z6J2 395 aaPredicted RBP16.27■□□□□ 0.2
LDB3-208ENST00000623007 LDB1Q86U70 411 aaPredicted RBP16.27■□□□□ 0.2
LDB3-208ENST00000623007 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 CHCHD4Q8N4Q1 142 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 CCNYL1Q8N7R7 359 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 TXNDC5Q8NBS9 432 aaKnown RBP16.27■□□□□ 0.2
LDB3-208ENST00000623007 MCUR1Q96AQ8 359 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 ULK4Q96C45 1275 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 ERVK-6Q9BXR3 956 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 CCL26Q9Y258 94 aa16.27■□□□□ 0.2
LDB3-208ENST00000623007 ZNF821O75541 412 aaPredicted RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 F7P08709 466 aaPredicted RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 CYP2A6P11509 494 aaPredicted RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 FMO4P31512 558 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 ALDH18A1P54886 795 aaKnown RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 KCNJ2P63252 427 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 TUBB3Q13509 450 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 PTPRCAPQ14761 206 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 SLC5A9Q2M3M2 681 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 DGKKQ5KSL6 1271 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 FRMD7Q6ZUT3 714 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 TAS2R42Q7RTR8 314 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 KDM1BQ8NB78 822 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 SMG7Q92540 1137 aaKnown RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 ASIC4Q96FT7 647 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 PLEKHG4BQ96PX9 1271 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 MCCC1Q96RQ3 725 aaPredicted RBP16.27■□□□□ 0.19
LDB3-208ENST00000623007 EBF4Q9BQW3 602 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 TBC1D10AQ9BXI6 508 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 CLPBQ9H078 707 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 FBXO10Q9UK96 956 aa16.27■□□□□ 0.19
LDB3-208ENST00000623007 ZNF106Q9H2Y7 1883 aaKnown RBP16.26■□□□□ 0.19
LDB3-208ENST00000623007 TRBV5-4A0A0C4DH59 114 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 GLYATL1P3A0A0U1RQE8 302 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 STX16-NPEPL1H3BU86 382 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 STX16O14662 325 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 HOXC11O43248 304 aaPredicted RBP16.26■□□□□ 0.19
LDB3-208ENST00000623007 NFATC1O95644 943 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 IRS1P35568 1242 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 NUMBP49757 651 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 RGS4P49798 205 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 ACCSLQ4AC99 568 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 WASHC2DQ5SRD0 308 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 LY6G5CQ5SRR4 150 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 FBXW10Q5XX13 1052 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 EFL1Q7Z2Z2 1120 aaKnown RBP16.26■□□□□ 0.19
LDB3-208ENST00000623007 OSCP1Q8WVF1 389 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 ANKRD49Q8WVL7 239 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 BIRC8Q96P09 236 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
LDB3-208ENST00000623007 P2RY12Q9H244 342 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 ALG9Q9H6U8 611 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 ARL8BQ9NVJ2 186 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 CLEC4EQ9ULY5 219 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 STK38LQ9Y2H1 464 aa16.26■□□□□ 0.19
LDB3-208ENST00000623007 BRCA2P51587 3418 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 GBF1Q92538 1859 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 RGSL1A5PLK6 1076 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 EIF3FO00303 357 aaPredicted RBP16.25■□□□□ 0.19
LDB3-208ENST00000623007 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 LMNAP02545 664 aaKnown RBP16.25■□□□□ 0.19
LDB3-208ENST00000623007 ARRB2P32121 409 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 HNF1BP35680 557 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 CCNHP51946 323 aaPredicted RBP16.25■□□□□ 0.19
LDB3-208ENST00000623007 CDC16Q13042 620 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 NFATC2Q13469 925 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 E2F5Q15329 346 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 DUSP6Q16828 381 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 PSAPL1Q6NUJ1 521 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 TEX9Q8N6V9 391 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 CEP70Q8NHQ1 597 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 ZNF707Q96C28 371 aaPredicted RBP16.25■□□□□ 0.19
LDB3-208ENST00000623007 HEPHQ9BQS7 1158 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms