RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PDE10AQ9Y233 779 aa7.9□□□□□ -1.14
VPS11-209ENST00000622309 GRIP1Q9Y3R0 1128 aa7.9□□□□□ -1.14
VPS11-209ENST00000622309 A0A1W2PRG6 482 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 E2F8A0AVK6 867 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 HMX2A2RU54 273 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 PRRT4C9JH25 899 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 NDUFA2O43678 99 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 MED26O95402 600 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 KRT19P08727 400 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 RBP1P09455 135 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 HOXB1P14653 301 aaPredicted RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 IL7RP16871 459 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 TYK2P29597 1187 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 CDKN2BP42772 138 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 PSMD8P48556 350 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 ARHGDIAP52565 204 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 IL1RL1Q01638 556 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 SCRN3Q0VDG4 424 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 GALEQ14376 348 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 OTUD3Q5T2D3 398 aaPredicted RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 GRTP1Q5TC63 336 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 DPP8Q6V1X1 898 aaPredicted RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 EFL1Q7Z2Z2 1120 aaKnown RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 CMTR2Q8IYT2 770 aaKnown RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 PJA1Q8NG27 643 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 NSUN6Q8TEA1 469 aaKnown RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 FAR1Q8WVX9 515 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 ZHX1-C8orf76Q96EF9 292 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 NODALQ96S42 347 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 KIFC1Q9BW19 673 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 FRMD8P1Q9BZ68 369 aaPredicted RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 ROGDIQ9GZN7 287 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 ZNF556Q9HAH1 456 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 MCCC2Q9HCC0 563 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 DDX4Q9NQI0 724 aaKnown RBP7.9□□□□□ -1.15
VPS11-209ENST00000622309 DPP3Q9NY33 737 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 MALT1Q9UDY8 824 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 MAN2B2Q9Y2E5 1009 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 DAGLAQ9Y4D2 1042 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 PCDHGA2Q9Y5H1 932 aa7.9□□□□□ -1.15
VPS11-209ENST00000622309 BRCA1P38398 1863 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 DLEC1Q9Y238 1755 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 SLC12A8A0AV02 714 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 GLTPD2A6NH11 291 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 HMX3A6NHT5 357 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 OR6C70A6NIJ9 312 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 AGAP5A6NIR3 686 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TRIM24O15164 1050 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 RGS5O15539 181 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TSPAN6O43657 245 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 OR5F1O95221 314 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TMEM11P17152 192 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 DDCP20711 480 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 MPSTP25325 297 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ERP29P30040 261 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 RPL14P50914 215 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 SNAP25P60880 206 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 NCS1P62166 190 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ADARB1P78563 741 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 PRPSAP1Q14558 356 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CRY2Q49AN0 593 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ANKRD39Q53RE8 183 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 NXNL2Q5VZ03 156 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 RAP1GAP2Q684P5 730 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 PNCKQ6P2M8 343 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TRMT10BQ6PF06 316 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 DARS2Q6PI48 645 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP51Q70EK9 711 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 BEND5Q7L4P6 421 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZNF720Q7Z2F6 126 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZER1Q7Z7L7 766 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 SPPL2CQ8IUH8 684 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 PHC2Q8IXK0 858 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CERS5Q8N5B7 392 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ELMO1Q92556 727 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 MARC2Q969Z3 335 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TESCQ96BS2 214 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TBATAQ96M53 351 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 GAD1Q99259 594 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 PRRG3Q9BZD7 231 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 POPDC2Q9HBU9 364 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TM9SF3Q9HD45 589 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 RANGRFQ9HD47 186 aaPredicted RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZNF224Q9NZL3 707 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 FBXL21Q9UKT6 434 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 COPG1Q9Y678 874 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZNF831Q5JPB2 1677 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 LACTBL1A8MY62 500 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 AP3D1O14617 1153 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 PI15O43692 258 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 C1QAP02745 245 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TP53P04637 393 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms