RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ATP6AP2O75787 350 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 TSPAN12O95859 305 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 KLKB1P03952 638 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PABPC4LP0CB38 370 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 PRR35P0CG20 571 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PRSS56P0CW18 603 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 ZNF26P17031 533 aaPredicted RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 ADARP55265 1226 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 FOXA1P55317 472 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 STX1BP61266 288 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 RPS24P62847 133 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 CYTH1Q15438 398 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 IL23RQ5VWK5 629 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 FAM219BQ5XKK7 198 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 OGFOD2Q6N063 350 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PAQR3Q6TCH7 311 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SPATA24Q86W54 205 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 GALNT15Q8N3T1 639 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 OR4K2Q8NGD2 314 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 ZFAND2BQ8WV99 257 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 FUBP1Q96AE4 644 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 SLCO4A1Q96BD0 722 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 CENPKQ9BS16 269 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 EPB41L1Q9H4G0 881 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SLC52A3Q9NQ40 469 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 MTRRQ9UBK8 725 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 CROTQ9UKG9 612 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 IKZF3Q9UKT9 509 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 A0A1B0GVM2 712 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 C2orf81A6NN90 581 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SYCE1LA8MT33 242 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 H7C0S8 307 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PIP5K1BO14986 540 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 ADAM12O43184 909 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 COCHO43405 550 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SRP72O76094 671 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 GJB5O95377 273 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SMIM18P0DKX4 95 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 HMGA1P17096 107 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 SLC7A1P30825 629 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 GRIA2P42262 883 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 TUFMP49411 452 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 CLCQ05315 142 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 RAD51Q06609 339 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 USP41Q3LFD5 358 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SPATS1Q496A3 300 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 RNF168Q8IYW5 571 aaPredicted RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 PCYOX1LQ8NBM8 494 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 ZNF483Q8TF39 744 aaPredicted RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 NSUN5Q96P11 429 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 HOPXQ9BPY8 73 aaPredicted RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 SPATA16Q9BXB7 569 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SEZ6LQ9BYH1 1024 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SLC2A11Q9BYW1 496 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PCDHAC1Q9H158 963 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 SCUBE2Q9NQ36 999 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 UBAP1Q9NZ09 502 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 MAP10Q9P2G4 905 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 HSFX1Q9UBD0 423 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 STOML2Q9UJZ1 356 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 AGO1Q9UL18 857 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 ABT1Q9ULW3 272 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 BACE2Q9Y5Z0 518 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 A0A0J9YYE9 177 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ECI2O75521 394 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 STC2O76061 302 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TCN1P20061 433 aaPredicted RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 LPOP22079 712 aaPredicted RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 PEX19P40855 299 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 SGSHP51688 502 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 GRIK2Q13002 908 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TCTN1Q2MV58 587 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 HECTD3Q5T447 861 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 CXorf57Q6NSI4 855 aaKnown RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 PRMT9Q6P2P2 845 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 PRSS55Q6UWB4 352 aaPredicted RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 ZNF783Q6ZMS7 281 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 DENND1CQ8IV53 801 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 HERC6Q8IVU3 1022 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 MIER2Q8N344 545 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 RYBPQ8N488 228 aaPredicted RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 NKAPQ8N5F7 415 aaKnown RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 MINDY1Q8N5J2 469 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TSPEARQ8WU66 669 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ATP6V1E2Q96A05 226 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 NUSAP1Q9BXS6 441 aaKnown RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 PLK2Q9NYY3 685 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 POLG2Q9UHN1 485 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TMCO1Q9UM00 188 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 NDUFAF1Q9Y375 327 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 AP4B1Q9Y6B7 739 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms