RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 KRT6BP04259 564 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 C2P06681 752 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CHRNGP07510 517 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ENO2P09104 434 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ALAS2P22557 587 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 MPSTP25325 297 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CCR10P46092 362 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KRT6CP48668 564 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 IL2P60568 153 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ANGPT1Q15389 498 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 TRIM60Q495X7 471 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 IRAK1BP1Q5VVH5 260 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 IYDQ6PHW0 289 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 POMZP3Q6PJE2 187 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 APLFQ8IW19 511 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KREMEN2Q8NCW0 462 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF296Q8WUU4 475 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 PHF21AQ96BD5 680 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM120BQ96EK7 910 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 OR52B2Q96RD2 323 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ATG10Q9H0Y0 220 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ATP13A3Q9H7F0 1226 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 NMRAL1Q9HBL8 299 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CHRAC1Q9NRG0 131 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ALKBH4Q9NXW9 302 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 LCTP09848 1927 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 TK2O00142 265 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CATP04040 527 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 RBP1P09455 135 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CCL5P13501 91 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CSF2RAP15509 400 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ITGAXP20702 1163 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 GSTT1P30711 240 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ROR2Q01974 943 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KLF10Q13118 480 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 TUBB3Q13509 450 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CCDC153Q494R4 210 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ATXN7L2Q5T6C5 722 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FOXB2Q5VYV0 432 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 HLA-DQA1Q5Y7H0 255 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ATG14Q6ZNE5 492 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 STRADAQ7RTN6 431 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 LZTR1Q8N653 840 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ATG16L2Q8NAA4 619 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 OR4K2Q8NGD2 314 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CLHC1Q8NHS4 586 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KCTD4Q8WVF5 259 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 C1orf50Q9BV19 199 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 NUP205Q92621 2012 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CAPN8A6NHC0 703 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SNUPNO95149 360 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 UMPSP11172 480 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 EFNA1P20827 205 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ITPKAP23677 461 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CRABP2P29373 138 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 RPL9P32969 192 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 TRPC1P48995 793 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 DLG1Q12959 904 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CCNIQ14094 377 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SPANXN3Q5MJ09 141 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 STEAP4Q687X5 459 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 HFE2Q6ZVN8 426 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FBXO22Q8NEZ5 403 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 DQX1Q8TE96 717 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SNX27Q96L92 541 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 PPP1R10Q96QC0 940 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ZCCHC2Q9C0B9 1178 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CDH19Q9H159 772 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CATSPERZQ9NTU4 200 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 DNAJC28Q9NX36 388 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 OPTCQ9UBM4 332 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ASB3Q9Y575 518 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SIP14410 1827 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ANKDD1BA6NHY2 528 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SAC3D1A6NKF1 404 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM72CH0Y354 149 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 RAD51BO15315 384 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 PGM3O95394 542 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KRT20P35900 424 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 MAPK10P53779 464 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 MRPS22P82650 360 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM72AQ5TYM5 149 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 ARHGAP17Q68EM7 881 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM72DQ6L9T8 149 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 AAGABQ6PD74 315 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM72BQ86X60 149 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 GATAD2AQ86YP4 633 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 PSTKQ8IV42 348 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 FBXW8Q8N3Y1 598 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SPPL2BQ8TCT7 592 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 MAPK15Q8TD08 544 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 OLFM3Q96PB7 478 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 TRAPPC9Q96Q05 1148 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 CDRT15Q96T59 188 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 RBBP8Q99708 897 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 PCDH12Q9NPG4 1184 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 PIGVQ9NUD9 493 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SSC5DA1L4H1 1573 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 ANK1P16157 1881 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms