RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CBWD5Q5RIA9 395 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 SSX9Q7RTT3 188 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 FOXRED2Q8IWF2 684 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 OSBPL7Q9BZF2 842 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 DDIT4Q9NX09 232 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 GNG8Q9UK08 70 aa14.99□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF521Q96K83 1311 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 MCAMP43121 646 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 CCR4P51679 360 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 LIMK2P53671 638 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 RNF151Q2KHN1 245 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 COL28A1Q2UY09 1125 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 BORAQ6PGQ7 559 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TSEN15Q8WW01 171 aaKnown RBP14.98□□□□□ -0.01
COL5A1-208ENST00000618395 GAD1Q99259 594 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 CCDC106Q9BWC9 280 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TBC1D17Q9HA65 648 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 A0A0J9YYE9 177 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TRAFD1O14545 582 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-208ENST00000618395 DNAJB2P25686 324 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 ACSM2AQ08AH3 577 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 ACSM2BQ68CK6 577 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF529Q6P280 563 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 SUCOQ9UBS9 1254 aaKnown RBP14.98□□□□□ -0.01
COL5A1-208ENST00000618395 PRR12Q9ULL5 1215 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 URB1O60287 2271 aaKnown RBP14.98□□□□□ -0.01
COL5A1-208ENST00000618395 NOMO3P69849 1222 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 SMARCB1Q12824 385 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 NOMO1Q15155 1222 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 EPHA7Q15375 998 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 PDZD9Q8IXQ8 264 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 PANX1Q96RD7 426 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 ALG2Q9H553 416 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 RETREG1Q9H6L5 497 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 C1orf109Q9NX04 203 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TRPV2Q9Y5S1 764 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 CD53P19397 219 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 PCSK1P29120 753 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 MFSD2AQ8NA29 543 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 OR2T12Q8NG77 320 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 UNKLQ9H9P5 680 aaKnown RBP14.98□□□□□ -0.01
COL5A1-208ENST00000618395 CDHR5Q9HBB8 845 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TADA2AO75478 443 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TFPTP0C1Z6 253 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 ALX1Q15699 326 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 KATNAL2Q8IYT4 538 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 GALNT11Q8NCW6 608 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 C3orf49Q96BT1 292 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 BIRC8Q96P09 236 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 CA5BQ9Y2D0 317 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 CD72P21854 359 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 RPL9P32969 192 aaKnown RBP14.98□□□□□ -0.01
COL5A1-208ENST00000618395 SV2CQ496J9 727 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 GPAT3Q53EU6 434 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 TOR1AIP1Q5JTV8 583 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 VSTM1Q6UX27 236 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 RNF149Q8NC42 400 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 PPP1R13LQ8WUF5 828 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 HEXDCQ8WVB3 486 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 SELENOMQ8WWX9 145 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 LRTOMTQ8WZ04 291 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 RNF31Q96EP0 1072 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 ANKEF1Q9NU02 776 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 VPS51Q9UID3 782 aa14.98□□□□□ -0.01
COL5A1-208ENST00000618395 H3BSA7 217 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 MYCLP1P12525 358 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 TCEA1P23193 301 aaKnown RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 CCDC54Q8NEL0 328 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ZFP14Q9HCL3 533 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 C19orf12Q9NSK7 152 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 KCNH4Q9UQ05 1017 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 PTPRTO14522 1441 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 MYL3P08590 195 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 FAM98CQ17RN3 349 aaKnown RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 GJD3Q8N144 294 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ISOC1Q96CN7 298 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 MECRQ9BV79 373 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 SEMA4BQ9NPR2 832 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 SHANK2Q9UPX8 1470 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ANXA2P2A6NMY6 339 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ANXA2P07355 339 aaKnown RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 NR2F1P10589 423 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 NTSP30990 170 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 DHRS1Q96LJ7 313 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 GLT1D1Q96MS3 346 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ACE2Q9BYF1 805 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ARMC1Q9NVT9 282 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ERVK-19Q9WJR5 959 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 NCS1P62166 190 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 MFSD5Q6N075 450 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ZYG11BQ9C0D3 744 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 A0A075B6Q4 140 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ADAMDEC1O15204 470 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 LTA4HP09960 611 aaKnown RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 BUD31P41223 144 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 SLC25A25Q6KCM7 469 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 FAM122CQ6P4D5 195 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms