RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 SAMD15Q9P1V8 674 aa22.56■■□□□ 1.2
CBWD3-213ENST00000618217 MAD1L1Q9Y6D9 718 aa22.56■■□□□ 1.2
CBWD3-213ENST00000618217 FADS2P1A8MWK0 482 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 EIF3HO15372 352 aaKnown RBP eCLIP22.55■■□□□ 1.2
CBWD3-213ENST00000618217 BCAT2O15382 392 aaPredicted RBP22.55■■□□□ 1.2
CBWD3-213ENST00000618217 EPN2O95208 641 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 WNT1P04628 370 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 PCCBP05166 539 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 PFN3P60673 137 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 PDIA2Q13087 525 aaKnown RBP22.55■■□□□ 1.2
CBWD3-213ENST00000618217 FASTKD3Q14CZ7 662 aaKnown RBP22.55■■□□□ 1.2
CBWD3-213ENST00000618217 CHRNA6Q15825 494 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 HP1BP3Q5SSJ5 553 aaPredicted RBP22.55■■□□□ 1.2
CBWD3-213ENST00000618217 CES3Q6UWW8 571 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 TRAM1L1Q8N609 369 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 MFSD2AQ8NA29 543 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 PIGKQ92643 395 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 ZSCAN5AQ9BUG6 496 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 TMPRSS11EQ9UL52 423 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 CNOT6Q9ULM6 557 aaKnown RBP22.55■■□□□ 1.2
CBWD3-213ENST00000618217 HCN4Q9Y3Q4 1203 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 FRYLO94915 3013 aa22.55■■□□□ 1.2
CBWD3-213ENST00000618217 ATXN2Q99700 1313 aaKnown RBP22.54■■□□□ 1.2
CBWD3-213ENST00000618217 UQCRHLA0A096LP55 91 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 GLYATL1P3A0A0U1RQE8 302 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 UQCRHP07919 91 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 TSHRP16473 764 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 HOXD12P35452 270 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 STAT4Q14765 748 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 ANKRD20A4Q4UJ75 823 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 LAIR1Q6GTX8 287 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 FAM151BQ6UXP7 276 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 ADAMTSL4Q6UY14 1074 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 KYAT3Q6YP21 454 aaKnown RBP22.54■■□□□ 1.2
CBWD3-213ENST00000618217 CENPUQ71F23 418 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 HDAC10Q969S8 669 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 NAT9Q9BTE0 207 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 TEX101Q9BY14 249 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 AASDHPPTQ9NRN7 309 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 GPR27Q9NS67 375 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 APPL1Q9UKG1 709 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 RAB23Q9ULC3 237 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 FNDC3AQ9Y2H6 1198 aaKnown RBP22.54■■□□□ 1.2
CBWD3-213ENST00000618217 WDR87Q6ZQQ6 2873 aa22.54■■□□□ 1.2
CBWD3-213ENST00000618217 ZCWPW2A0A1B0GU75 182 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 CCDC162PA2VCL2 907 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 AGAP14A8MT82 685 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 ARNTP27540 789 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 CA5AP35218 305 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 HLTFQ14527 1009 aaKnown RBP eCLIP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 RAET1GQ6H3X3 334 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 IQCHQ86VS3 1027 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 EIF1ADQ8N9N8 165 aaKnown RBP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 FAM174AQ8TBP5 190 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 SPATA16Q9BXB7 569 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 NFU1Q9UMS0 254 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 A0A1B0GTW7 788 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 A6NNZ2 444 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 SRP72O76094 671 aaKnown RBP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 USP1O94782 785 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 PRAMEF1O95521 474 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 PGAM1P18669 254 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 CD38P28907 300 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 DPP6P42658 865 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 GPR1P46091 355 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 ARCN1P48444 511 aaKnown RBP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 AFF3P51826 1226 aaKnown RBP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 ERCC6LQ2NKX8 1250 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 ATP13A5Q4VNC0 1218 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 PDPK2PQ6A1A2 396 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 OR13H1Q8NG92 308 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 UBXN4Q92575 508 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 SGSM3Q96HU1 749 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 APOOQ9BUR5 198 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 SAYSD1Q9NPB0 183 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 CHMP2BQ9UQN3 213 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 OR1A2Q9Y585 309 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 PCDHGA5Q9Y5G8 931 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 RPS6KL1Q9Y6S9 549 aa22.53■■□□□ 1.2
CBWD3-213ENST00000618217 V9GYY5 206 aaPredicted RBP22.53■■□□□ 1.2
CBWD3-213ENST00000618217 TOR1BO14657 336 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 GPR39O43194 453 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A9O60656 530 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 PYGLP06737 847 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 HOXC4P09017 264 aaPredicted RBP22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A6P19224 532 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A1P22309 533 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A4P22310 534 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A3P35503 534 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A5P35504 534 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 YPEL5P62699 121 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 TPRG1LQ5T0D9 272 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 STEAP4Q687X5 459 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 LAYNQ6UX15 382 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 Q6ZSR6 202 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 HEATR4Q86WZ0 1026 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 CCNJLQ8IV13 435 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 ANKMY2Q8IV38 441 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 ZBED8Q8IZ13 594 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms