RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 MYRFLQ96LU7 910 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 C9orf16Q9BUW7 83 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SLC52A3Q9NQ40 469 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SMOXQ9NWM0 555 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 DNAJC15Q9Y5T4 150 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 M0QZQ0 153 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TNFRSF10BO14763 440 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 MSI1O43347 362 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 GPIP06744 558 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 FCGR1AP12314 374 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CSF2RAP15509 400 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 PAX3P23760 479 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 BMP8BP34820 402 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CCT8P50990 548 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 ARSDP51689 593 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CCL23P55773 120 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SH3BP2P78314 561 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SLC36A3Q495N2 470 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 ZBED5Q49AG3 693 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TBCELQ5QJ74 424 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 OGFOD2Q6N063 350 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 MSANTD2Q6P1R3 559 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TAF2Q6P1X5 1199 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SCD5Q86SK9 330 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CBR4Q8N4T8 237 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SCAMP5Q8TAC9 235 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 RHEBL1Q8TAI7 183 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 VWCEQ96DN2 955 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CENPNQ96H22 339 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 SCLYQ96I15 445 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 ADI1Q9BV57 179 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TRIM54Q9BYV2 358 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 NT5MQ9NPB1 228 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CD320Q9NPF0 282 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 RGS18Q9NS28 235 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 GID8Q9NWU2 228 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CMTM6Q9NX76 183 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 DSEQ9UL01 958 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 PCDHA9Q9Y5H5 950 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 TRPV2Q9Y5S1 764 aa12.89□□□□□ -0.35
CLTCL1-210ENST00000617926 CDH23Q9H251 3354 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 CASTOR2A6NHX0 329 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SAC3D1A6NKF1 404 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 AZIN1O14977 448 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 LDB2O43679 373 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 VPS4BO75351 444 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 RASAL1O95294 804 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 ATXN1LP0C7T5 689 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PRR35P0CG20 571 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 RHOQP17081 205 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 NELFEP18615 380 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 IL10P22301 178 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SLC6A2P23975 617 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 FASP25445 335 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 CD86P42081 329 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SCNN1GP51170 649 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SLC5A3P53794 718 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 MLLT6P55198 1093 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 ADARP55265 1226 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 NUP107P57740 925 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 IHHQ14623 411 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PITRM1Q5JRX3 1037 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PIK3R6Q5UE93 754 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 FAM219BQ5XKK7 198 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 ZNF549Q6P9A3 640 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 GPR141Q7Z602 305 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PIM3Q86V86 326 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PTRH1Q86Y79 214 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 CROCCP3Q8IVE0 287 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 COLGALT2Q8IYK4 626 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PTGR2Q8N8N7 351 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PAPD5Q8NDF8 572 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 OR10T2Q8NGX3 314 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SEPT8Q92599 483 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 HDAC10Q969S8 669 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SLC39A13Q96H72 371 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 SERPINB11Q96P15 392 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 ATOH8Q96SQ7 321 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
CLTCL1-210ENST00000617926 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms