RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TCF7L2Q9NQB0 619 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 SPHK2Q9NRA0 654 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 GTSE1Q9NYZ3 720 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 RPL26L1Q9UNX3 145 aaKnown RBP17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 HS3ST2Q9Y278 367 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 VPS9D1Q9Y2B5 631 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 WNT6Q9Y6F9 365 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 A8MX80 341 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 F8W8V4 182 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 GSC2O15499 205 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 NIPSNAP2O75323 286 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 PKMP14618 531 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 EPHA3P29320 983 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 HK2P52789 917 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 PDCD2Q16342 344 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 ACCSLQ4AC99 568 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SH2D4BQ5SQS7 431 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 LY6G5CQ5SRR4 150 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SLC22A9Q8IVM8 553 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 MYLIPQ8WY64 445 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 MCOLN1Q9GZU1 580 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 MTIF3Q9H2K0 278 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZFYVE1Q9HBF4 777 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SPECC1L-ADORA2AF8WAN1 911 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 CLDN7O95471 211 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 PABPC1P11940 636 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SERPINA4P29622 427 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SERPINB5P36952 375 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SNRPD1P62314 119 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SEMG2Q02383 582 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 CACNG1Q06432 222 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 FAM151BQ6UXP7 276 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 PHTF2Q8N3S3 785 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 RBM15BQ8NDT2 890 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZNF707Q96C28 371 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 TNFRSF12AQ9NP84 129 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 VTI1BQ9UEU0 232 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SLCO3A1Q9UIG8 710 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SLC25A13Q9UJS0 675 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 IKZF3Q9UKT9 509 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 OAS3Q9Y6K5 1087 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 SLC30A1Q9Y6M5 507 aa17.26■□□□□ 0.35
PCDHGC3-205ENST00000617641 UBXN8O00124 270 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 PFDN6O15212 129 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 DCXO43602 365 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 CA3P07451 260 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 MYLK3Q32MK0 819 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 AARS2Q5JTZ9 985 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 POU5F2Q8N7G0 328 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 SIDT2Q8NBJ9 832 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 LEMD2Q8NC56 503 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 SYTL2Q9HCH5 934 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 CAPN8A6NHC0 703 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 SLCO1B7G3V0H7 640 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 GAPDHSO14556 408 aaPredicted RBP17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 CLGNO14967 610 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 TRIM24O15164 1050 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 SMIM24O75264 130 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 IMPDH1P20839 514 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 CA5AP35218 305 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 SULT2A1Q06520 285 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 CDKN3Q16667 212 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 LSM12Q3MHD2 195 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 FRMD7Q6ZUT3 714 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 TSPAN33Q86UF1 283 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 NAT16Q8N8M0 369 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 ISG20Q96AZ6 181 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 CCDC97Q96F63 343 aaPredicted RBP17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 ATOH8Q96SQ7 321 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 DERL2Q9GZP9 239 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 GSTO2Q9H4Y5 243 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 FIS1Q9Y3D6 152 aa17.25■□□□□ 0.35
PCDHGC3-205ENST00000617641 MEI4A8MW99 385 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 VPS26AO75436 327 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 PRAMEF1O95521 474 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 RB1P06400 928 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 TSPAN8P19075 237 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 RAD51Q06609 339 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZNF678Q5SXM1 525 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ADGRD2Q7Z7M1 963 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 PTGR2Q8N8N7 351 aaPredicted RBP17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 MCUR1Q96AQ8 359 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 TFB2MQ9H5Q4 396 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZDHHC6Q9H6R6 413 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 TBC1D14Q9P2M4 693 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 SCN8AQ9UQD0 1980 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 NPIPB15A6NHN6 443 aaPredicted RBP17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 IQCF5A8MTL0 148 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 PYGLP06737 847 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 TPBGLP0DKB5 382 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 MTHFD2P13995 350 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 PTGER3P43115 390 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 CCNHP51946 323 aaPredicted RBP17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 NFKB2Q00653 900 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ECT2LQ008S8 904 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 FAM219BQ5XKK7 198 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 DPY19L3Q6ZPD9 716 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 CUZD1Q86UP6 607 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ADGRG2Q8IZP9 1017 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms