RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ARTNQ5T4W7 220 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 ZNF783Q6ZMS7 281 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 ARCQ7LC44 396 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 POLNQ7Z5Q5 900 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 CCDC50Q8IVM0 306 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 RCOR2Q8IZ40 523 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 RXFP2Q8WXD0 754 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 ISG20Q96AZ6 181 aaKnown RBP17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 CCDC74BQ96LY2 380 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 CNPY3Q9BT09 278 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 APOOQ9BUR5 198 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 WDCPQ9H6R7 721 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 GPN2Q9H9Y4 310 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 RRN3Q9NYV6 651 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 COQ6Q9Y2Z9 468 aa17.61■□□□□ 0.41
TRAPPC3-209ENST00000616395 LRP4O75096 1905 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 IGLV3-10A0A075B6K4 115 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 VPS4BO75351 444 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 SDC4P31431 198 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 GNA12Q03113 381 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 C2orf54Q08AI8 447 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 BRD3Q15059 726 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 KATNAL2Q8IYT4 538 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 TEX19Q8NA77 164 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 EXD1Q8NHP7 514 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 OR1E3Q8WZA6 343 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 WDR92Q96MX6 357 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 DDA1Q9BW61 102 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 OSBPL1AQ9BXW6 950 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 DPEP2Q9H4A9 486 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 TMEM51Q9NW97 253 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 FEZ2Q9UHY8 353 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 VPS4AQ9UN37 437 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 DGKBQ9Y6T7 804 aa17.6■□□□□ 0.41
TRAPPC3-209ENST00000616395 DOCK4Q8N1I0 1966 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 TCRBV5S1A1TA0A578 114 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 C2CD4BA6NLJ0 364 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 SEMA7AO75326 666 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 POP4O95707 220 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 RHOXF2BP0C7M4 288 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 ALDH4A1P30038 563 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 RFC1P35251 1148 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 ZNF143P52747 638 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 SEPT6Q14141 434 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 MYLK3Q32MK0 819 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 CCDC14Q49A88 953 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 BRMS1LQ5PSV4 323 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 GDPD4Q6W3E5 623 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 BNIPLQ7Z465 357 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 UNC5BQ8IZJ1 945 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 OR2AP1Q8NGE2 309 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 ATL2Q8NHH9 583 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 PGAP3Q96FM1 320 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 MS4A14Q96JA4 679 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 RHOXF2Q9BQY4 288 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 SLC39A1Q9NY26 324 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 CELSR2Q9HCU4 2923 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 CENPEQ02224 2701 aa17.59■□□□□ 0.41
TRAPPC3-209ENST00000616395 COL8A1P27658 744 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 PCK1P35558 622 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 ACVRL1P37023 503 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAZP56270 477 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 POLD3Q15054 466 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 ATXN7L2Q5T6C5 722 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 ATP1A1-AS1Q5TC04 95 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAP7D3Q8IWC1 876 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 AGBL5Q8NDL9 886 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 CCL4L1Q8NHW4 92 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 KIAA1143Q96AT1 154 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 C1orf74Q96LT6 269 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 HAPLN3Q96S86 360 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAGEB5Q9BZ81 275 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 ASPSCR1Q9BZE9 553 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 TMEM168Q9H0V1 697 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 MRPL40Q9NQ50 206 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 PILRAQ9UKJ1 303 aa17.58■□□□□ 0.4
TRAPPC3-209ENST00000616395 LOC101059948A0A1B0GTJ6 334 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 TMEM202A6NGA9 273 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 PDE2AO00408 941 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 PRPSAP2O60256 369 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 GSRP00390 522 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 KRT1P04264 644 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 PRKCGP05129 697 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 PCCBP05166 539 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 TIMP2P16035 220 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 POU3F2P20265 443 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 CD1CP29017 333 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 SNRPD1P62314 119 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 LEKR1Q6ZMV7 388 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 IFT20Q8IY31 132 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 CCDC185Q8N715 623 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 GALNT11Q8NCW6 608 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 ANKRD7Q92527 254 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 ARHGEF2Q92974 986 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 FGF22Q9HCT0 170 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms