RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 UGP2Q16851 508 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 BNIPLQ7Z465 357 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 FAM167AQ96KS9 214 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 COQ7Q99807 217 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 CAMK2BQ13554 666 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 AAK1Q2M2I8 961 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 PAGE3Q5JUK9 113 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 PKN3Q6P5Z2 889 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 LGI2Q8N0V4 545 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 TBL1YQ9BQ87 522 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 ASB7Q9H672 318 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 ZNF408Q9H9D4 720 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 KIAA1257Q9ULG3 409 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 HS6ST1O60243 411 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 LRIG2O94898 1065 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 KCNK10P57789 538 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 ANKRD13AQ8IZ07 590 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 TWIST2Q8WVJ9 160 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 TRUB1Q8WWH5 349 aaKnown RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 ALPK1Q96QP1 1244 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 SLC30A3Q99726 388 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 WDCPQ9H6R7 721 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 KCTD3Q9Y597 815 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 DNAJC15Q9Y5T4 150 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 TARM1B6A8C7 271 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 OR4D2P58180 307 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
MSH6-214ENST00000616033 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 REPS2Q8NFH8 660 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 WNT8BQ93098 351 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 TMBIM1Q969X1 311 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 BIRC7Q96CA5 298 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 SH3YL1Q96HL8 342 aaPredicted RBP13.12□□□□□ -0.31
MSH6-214ENST00000616033 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 RIC8BQ9NVN3 520 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 FAM50BQ9Y247 325 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 ADM5C9JUS6 153 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 ACOX3O15254 700 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 SNX2O60749 519 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 RASAL1O95294 804 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
MSH6-214ENST00000616033 MAP2K4P45985 399 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 UFM1P61960 85 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 IL5RAQ01344 420 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 IFITM3Q01628 133 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 GHRHRQ02643 423 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 INAVAQ3KP66 663 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 PAGE2Q7Z2X7 111 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 PEX5LQ8IYB4 626 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 OR7A2PQ8NGA2 310 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 ZNF420Q8TAQ5 688 aaPredicted RBP13.12□□□□□ -0.31
MSH6-214ENST00000616033 DACH2Q96NX9 599 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 GIMAP4Q9NUV9 329 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 RBM22Q9NW64 420 aaKnown RBP eCLIP13.12□□□□□ -0.31
MSH6-214ENST00000616033 SEPT3Q9UH03 358 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 UTS2RQ9UKP6 389 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 PCDHB3Q9Y5E6 796 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 LRRC37AA6NMS7 1700 aa13.12□□□□□ -0.31
MSH6-214ENST00000616033 ANKRD34BA5PLL1 514 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 SUPT3HB4E1H0 165 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 SLC22A2O15244 555 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 NPHS1O60500 1241 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 HTR1BP28222 390 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MAPRE1Q15691 268 aaKnown RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 UGT3A2Q3SY77 523 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 PCID2Q5JVF3 399 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 STRADAQ7RTN6 431 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 CNIH3Q8TBE1 160 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 HDAC2Q92769 488 aaKnown RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 NCLNQ969V3 563 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 FEM1AQ9BSK4 669 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 TOR3AQ9H497 397 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 HMG20AQ9NP66 347 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
MSH6-214ENST00000616033 RGPD3A6NKT7 1758 aaPredicted RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 H0YJX3 145 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 CNTN5O94779 1100 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MFN2O95140 757 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 INHBBP09529 407 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 GPX3P22352 226 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms