RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TMEM9Q9P0T7 183 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 ZNHIT2Q9UHR6 403 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PPIL1Q9Y3C6 166 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 ARHGEF17Q96PE2 2063 aaPredicted RBP17.76■□□□□ 0.43
SMN2-213ENST00000614240 SMTNL1A8MU46 457 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 TERTO14746 1132 aaKnown RBP17.75■□□□□ 0.43
SMN2-213ENST00000614240 DUX1O43812 170 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 LIFP15018 202 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 ZNF30P17039 623 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 UGT1A3P35503 534 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 PTSQ03393 145 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 SQSTM1Q13501 440 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 TXNRD3NBQ6F5E7 133 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 BORAQ6PGQ7 559 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 LRRC49Q8IUZ0 686 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 EXD1Q8NHP7 514 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 TEKT4Q8WW24 435 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 SMIM14Q96QK8 99 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 RIOK2Q9BVS4 552 aaKnown RBP17.75■□□□□ 0.43
SMN2-213ENST00000614240 POLR1EQ9GZS1 481 aaKnown RBP17.75■□□□□ 0.43
SMN2-213ENST00000614240 ISCUQ9H1K1 167 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 STN1Q9H668 368 aaKnown RBP17.75■□□□□ 0.43
SMN2-213ENST00000614240 HAUS2Q9NVX0 235 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 OCIAD1Q9NX40 245 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 IP6K2Q9UHH9 426 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
SMN2-213ENST00000614240 A8MU76 341 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 B4E171 279 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 MAP3K6O95382 1288 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 SOD1P00441 154 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 CA4P22748 312 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 TSPAN7P41732 249 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 RAB15P59190 212 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 TDRD12Q587J7 1177 aaKnown RBP17.74■□□□□ 0.43
SMN2-213ENST00000614240 ANKS6Q68DC2 871 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 ZNF765Q7L2R6 523 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 SLC37A2Q8TED4 501 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 KIAA1143Q96AT1 154 aaPredicted RBP17.74■□□□□ 0.43
SMN2-213ENST00000614240 ADNPQ9H2P0 1102 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 DNPEPQ9ULA0 475 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 CHKBQ9Y259 395 aa17.74■□□□□ 0.43
SMN2-213ENST00000614240 A0A0J9YYE9 177 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 ZNF891A8MT65 544 aaPredicted RBP17.73■□□□□ 0.43
SMN2-213ENST00000614240 RAD1O60671 282 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 TRBC1P01850 177 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 CES1P23141 567 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 MAN1A1P33908 653 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
SMN2-213ENST00000614240 MAPK9P45984 424 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 CCR10P46092 362 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 FASLGP48023 281 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 ARSDP51689 593 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 STC1P52823 247 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 DSC2Q02487 901 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 MMRN1Q13201 1228 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 TIGD7Q6NT04 549 aaPredicted RBP17.73■□□□□ 0.43
SMN2-213ENST00000614240 CHST15Q7LFX5 561 aaPredicted RBP17.73■□□□□ 0.43
SMN2-213ENST00000614240 NLRP8Q86W28 1048 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 SFRP1Q8N474 314 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 TEX26Q8N6G2 289 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 BTBD6Q96KE9 485 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 TEFMQ96QE5 360 aaKnown RBP17.73■□□□□ 0.43
SMN2-213ENST00000614240 AGAP2Q99490 1192 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 PRKAB1Q9Y478 270 aa17.73■□□□□ 0.43
SMN2-213ENST00000614240 SPTA1P02549 2419 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 CAPN5O15484 640 aaPredicted RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 FZD6O60353 706 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 MBD3O95983 291 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 GJC1P36383 396 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 GARSP41250 739 aaKnown RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 NOP2P46087 812 aaKnown RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 ZNF165P49910 485 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 HHEXQ03014 270 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 KCNAB2Q13303 367 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 NFATC2Q13469 925 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 HADHQ16836 314 aaKnown RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 PTRH1Q86Y79 214 aaKnown RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 LPCAT1Q8NF37 534 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 NCSTNQ92542 709 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 SH3KBP1Q96B97 665 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 CTRCQ99895 268 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 NUP85Q9BW27 656 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 THAP2Q9H0W7 228 aa17.72■□□□□ 0.43
SMN2-213ENST00000614240 GPN2Q9H9Y4 310 aaPredicted RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 RBM22Q9NW64 420 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMN2-213ENST00000614240 RCOR3Q9P2K3 495 aaPredicted RBP17.72■□□□□ 0.43
SMN2-213ENST00000614240 MYO1FO00160 1098 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 MATN3O15232 486 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 MFSD11O43934 449 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 SNX2O60749 519 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 CLDN7O95471 211 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 SERPINC1P01008 464 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 SLC2A4P14672 509 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 POLE2P56282 527 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 SLC25A11Q02978 314 aaKnown RBP17.71■□□□□ 0.43
SMN2-213ENST00000614240 NFKBIBQ15653 356 aa17.71■□□□□ 0.43
SMN2-213ENST00000614240 WDR74Q6RFH5 385 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms