RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 LACTB2Q53H82 288 aaPredicted RBP23.28■■□□□ 1.32
MMP28-203ENST00000612672 ADAMTSL4Q6UY14 1074 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 PIH1D2Q8WWB5 315 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 SCRN2Q96FV2 425 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 TEFMQ96QE5 360 aaKnown RBP23.28■■□□□ 1.32
MMP28-203ENST00000612672 SLC38A3Q99624 504 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 DACH1Q9UI36 760 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 OAS3Q9Y6K5 1087 aaKnown RBP23.28■■□□□ 1.32
MMP28-203ENST00000612672 CENPEQ02224 2701 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 FURINP09958 794 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 CYP2A6P11509 494 aaPredicted RBP23.27■■□□□ 1.32
MMP28-203ENST00000612672 TCF4P15884 667 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 NFATC2Q13469 925 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 LRRC66Q68CR7 880 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 C16orf46Q6P387 395 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 COX14Q96I36 57 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 ZNF599Q96NL3 588 aa23.27■■□□□ 1.32
MMP28-203ENST00000612672 SIDT1Q9NXL6 827 aaKnown RBP23.27■■□□□ 1.32
MMP28-203ENST00000612672 TMCO5BA8MYB1 307 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 MAFKO60675 156 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 ZNF28P17035 718 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 COPB1P53618 953 aaKnown RBP23.26■■□□□ 1.31
MMP28-203ENST00000612672 ABHD18Q0P651 414 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 PLEKHA7Q6IQ23 1121 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 WDR74Q6RFH5 385 aaPredicted RBP23.26■■□□□ 1.31
MMP28-203ENST00000612672 CEACAM20Q6UY09 585 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 OR10G6Q8NH81 332 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 ENOX1Q8TC92 643 aaKnown RBP23.26■■□□□ 1.31
MMP28-203ENST00000612672 APOBEC4Q8WW27 367 aaKnown RBP23.26■■□□□ 1.31
MMP28-203ENST00000612672 KIAA1143Q96AT1 154 aaPredicted RBP23.26■■□□□ 1.31
MMP28-203ENST00000612672 AP2M1Q96CW1 435 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 AHCYL2Q96HN2 611 aaKnown RBP23.26■■□□□ 1.31
MMP28-203ENST00000612672 FBXO8Q9NRD0 319 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 KCTD5Q9NXV2 234 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 TBC1D29Q9UFV1 150 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 KLHL3Q9UH77 587 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 PPIL1Q9Y3C6 166 aa23.26■■□□□ 1.31
MMP28-203ENST00000612672 A6NCN8 305 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 EIF3CLB5ME19 914 aaKnown RBP23.25■■□□□ 1.31
MMP28-203ENST00000612672 INPP4BO15327 924 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 DNAJC6O75061 913 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 LRCH4O75427 683 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 AMPD1P23109 780 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 IL1R2P27930 398 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 STAT5AP42229 794 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 CD97P48960 835 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 PPM1FP49593 454 aaPredicted RBP23.25■■□□□ 1.31
MMP28-203ENST00000612672 MLLT10P55197 1068 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 HHEXQ03014 270 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 PTSQ03393 145 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 FKBP15Q5T1M5 1219 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 GALNT13Q8IUC8 556 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 NEK11Q8NG66 645 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 NCSTNQ92542 709 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 EIF3CQ99613 913 aaKnown RBP23.25■■□□□ 1.31
MMP28-203ENST00000612672 KCNMB2Q9Y691 235 aa23.25■■□□□ 1.31
MMP28-203ENST00000612672 RP1L1Q8IWN7 2480 aaPredicted RBP23.25■■□□□ 1.31
MMP28-203ENST00000612672 A0A1W2PQ67 120 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 TMEM191CA6NGB0 347 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 FZD6O60353 706 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 UQCRFS1P47985 274 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 TMEM135Q86UB9 458 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 TBC1D10AQ9BXI6 508 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 FANCLQ9NW38 375 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 CNOT6Q9ULM6 557 aaKnown RBP23.24■■□□□ 1.31
MMP28-203ENST00000612672 KCNK6Q9Y257 313 aa23.24■■□□□ 1.31
MMP28-203ENST00000612672 ATP1A1P05023 1023 aaKnown RBP23.23■■□□□ 1.31
MMP28-203ENST00000612672 TCN2P20062 427 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 MAPK9P45984 424 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 HCAR3P49019 387 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 GFERP55789 205 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 KLRB1Q12918 225 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 USP45Q70EL2 814 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 KDELC2Q7Z4H8 507 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 IRF2BP2Q7Z5L9 587 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 PCMTD1Q96MG8 357 aaPredicted RBP23.23■■□□□ 1.31
MMP28-203ENST00000612672 WDR24Q96S15 920 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 RIOK2Q9BVS4 552 aaKnown RBP23.23■■□□□ 1.31
MMP28-203ENST00000612672 NUP62CLQ9H1M0 184 aa23.23■■□□□ 1.31
MMP28-203ENST00000612672 SARS2Q9NP81 518 aaKnown RBP23.23■■□□□ 1.31
MMP28-203ENST00000612672 CRYBG3Q68DQ2 2970 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 LGALS16A8MUM7 142 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 PRPSAP2O60256 369 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 PDGFAP04085 211 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 HSPA9P38646 679 aaKnown RBP23.22■■□□□ 1.31
MMP28-203ENST00000612672 PEX6Q13608 980 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 SMTNL2Q2TAL5 461 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 C4orf17Q53FE4 359 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 ARMC12Q5T9G4 340 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 APTXQ7Z2E3 356 aaKnown RBP23.22■■□□□ 1.31
MMP28-203ENST00000612672 PARVAQ9NVD7 372 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 OGFRQ9NZT2 677 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 RPS6KL1Q9Y6S9 549 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 SHANK1Q9Y566 2161 aa23.22■■□□□ 1.31
MMP28-203ENST00000612672 KRT7P08729 469 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 STC1P52823 247 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 LRP8Q14114 963 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 CRTC2Q53ET0 693 aaPredicted RBP23.21■■□□□ 1.31
MMP28-203ENST00000612672 TXNRD3NBQ6F5E7 133 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 IYDQ6PHW0 289 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms