RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ANKRD20A8PQ5CZ79 823 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 XKR5Q6UX68 686 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 RAVER1Q8IY67 606 aaKnown RBP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 NRSN1Q8IZ57 195 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 RCBTB1Q8NDN9 531 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 ZNF564Q8TBZ8 553 aaPredicted RBP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 COX14Q96I36 57 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 CCDC74BQ96LY2 380 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 TSGA13Q96PP4 275 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 DPYSL5Q9BPU6 564 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 ZNF670Q9BS34 389 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 RBM22Q9NW64 420 aaKnown RBP eCLIP17.68■□□□□ 0.422e-10■■■■□ 23.7
SSBP1-215ENST00000612337 MYO18BQ8IUG5 2567 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 IGHV1OR21-1A0A087WYE8 117 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 CCL4P13236 92 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 CA4P22748 312 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 LIMK2P53671 638 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 UBASH3AP57075 661 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 DSC2Q02487 901 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 LRP8Q14114 963 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 PDK2Q15119 407 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 LINC00303Q3SY05 128 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 ATP13A4Q4VNC1 1196 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 NKAIN2Q5VXU1 208 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 TRIM74Q86UV6 250 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 VASH2Q86V25 355 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 GALNT13Q8IUC8 556 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 EXD3Q8N9H8 876 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 OR4D9Q8NGE8 314 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 EXD1Q8NHP7 514 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 ARRDC2Q8TBH0 407 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 CPLX3Q8WVH0 158 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 AGAP2Q99490 1192 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 RIOK2Q9BVS4 552 aaKnown RBP17.67■□□□□ 0.42
SSBP1-215ENST00000612337 CBX8Q9HC52 389 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 CHKBQ9Y259 395 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 LUC7L2Q9Y383 392 aaKnown RBP17.67■□□□□ 0.42
SSBP1-215ENST00000612337 TTLL3Q9Y4R7 772 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 PCDHGA4Q9Y5G9 962 aa17.67■□□□□ 0.42
SSBP1-215ENST00000612337 SDK2Q58EX2 2172 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 MAP3K6O95382 1288 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 PRLP01236 227 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 THRAP10827 490 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 FGF3P11487 239 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-215ENST00000612337 GJC1P36383 396 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 FASLGP48023 281 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 RPL26P61254 145 aaKnown RBP17.66■□□□□ 0.42
SSBP1-215ENST00000612337 MARK2Q7KZI7 788 aaKnown RBP17.66■□□□□ 0.42
SSBP1-215ENST00000612337 LUZP1Q86V48 1076 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 MAP7D3Q8IWC1 876 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.66■□□□□ 0.42
SSBP1-215ENST00000612337 ZSCAN1Q8NBB4 408 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 EXTL1Q92935 676 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 FAF2Q96CS3 445 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 TAAR9Q96RI9 348 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 LYSMD1Q96S90 227 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 KCNK4Q9NYG8 393 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 NENFQ9UMX5 172 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 RPL26L1Q9UNX3 145 aaKnown RBP17.66■□□□□ 0.42
SSBP1-215ENST00000612337 PCDHGA3Q9Y5H0 932 aa17.66■□□□□ 0.42
SSBP1-215ENST00000612337 STMND1H3BQB6 276 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 PROSCO94903 275 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 CLDN7O95471 211 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 MX2P20592 715 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 CSF2RBP32927 897 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 GPLD1P80108 840 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 NIPAL4Q0D2K0 466 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 CPNE8Q86YQ8 564 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 AGBL5Q8NDL9 886 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 LPCAT1Q8NF37 534 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 PCDH9Q9HC56 1237 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 VPS18Q9P253 973 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 CTTNBP2NLQ9P2B4 639 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 UVRAGQ9P2Y5 699 aa17.65■□□□□ 0.42
SSBP1-215ENST00000612337 INPP4BO15327 924 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 DNAJC6O75061 913 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 ASMTLO95671 621 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 GYPCP04921 128 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 HLA-DQB2P05538 268 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 KRT7P08729 469 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 WT1P19544 449 aaPredicted RBP17.64■□□□□ 0.41
SSBP1-215ENST00000612337 CSTF2P33240 577 aaKnown RBP eCLIP17.64■□□□□ 0.412e-7■■□□□ 13.7
SSBP1-215ENST00000612337 ARSDP51689 593 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 TAS2R40P59535 323 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 GBE1Q04446 702 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 TMEM71Q6P5X7 295 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 SFRP1Q8N474 314 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 PQLC3Q8N755 202 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 CCDC112Q8NEF3 446 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 SLC37A2Q8TED4 501 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 HDAC11Q96DB2 347 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 ARHGAP9Q9BRR9 750 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 ZNHIT2Q9UHR6 403 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 LCMT1Q9UIC8 334 aa17.64■□□□□ 0.41
SSBP1-215ENST00000612337 CNOT6Q9ULM6 557 aaKnown RBP17.64■□□□□ 0.41
SSBP1-215ENST00000612337 SYCE3A1L190 88 aa17.63■□□□□ 0.41
SSBP1-215ENST00000612337 SLC28A2O43868 658 aa17.63■□□□□ 0.41
SSBP1-215ENST00000612337 H2AFZP0C0S5 128 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms