RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 AK5Q9Y6K8 562 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 GOLGA4Q13439 2230 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 ILVBLA1L0T0 632 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 TTC24A2A3L6 582 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 SLC22A3O75751 556 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ITGBL1O95965 494 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 IGSF6O95976 241 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 LRG1P02750 347 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PIK3CGP48736 1102 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 RHDQ02161 417 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 TTC23LQ6PF05 361 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 RPS27LQ71UM5 84 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 NPAS4Q8IUM7 802 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CPNE9Q8IYJ1 553 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 FAM47BQ8NA70 645 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 IGSF8Q969P0 613 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SH3GL1Q99961 368 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 PIF1Q9H611 641 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ZBTB26Q9HCK0 441 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ARL15Q9NXU5 204 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 MARCH4Q9P2E8 410 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 KLQ9UEF7 1012 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 DYTNA2CJ06 578 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 FAM149AA5PLN7 773 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 SEC22BO75396 215 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 BCAS2O75934 225 aaPredicted RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 S1PR4O95977 384 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 GLDCP23378 1020 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 SIRPB2Q5JXA9 342 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 TMTC4Q5T4D3 741 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 SNX19Q92543 992 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 C9orf16Q9BUW7 83 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 NUSAP1Q9BXS6 441 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 RNF208Q9H0X6 261 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ZMYM5Q9UJ78 669 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 GABRQQ9UN88 632 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 SCN9AQ15858 1988 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 LAMB1P07942 1786 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 A0A087WXM4 84 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CCDC154A6NI56 674 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 OTCP00480 354 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 NELFEP18615 380 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 SLC11A1P49279 550 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CCNHP51946 323 aaPredicted RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 AP1S1P61966 158 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 BOP1Q14137 746 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 PTPRCAPQ14761 206 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 PITRM1Q5JRX3 1037 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ITIH5Q86UX2 942 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 PIM3Q86V86 326 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ISL2Q96A47 359 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ROPN1LQ96C74 230 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 DGCR14Q96DF8 476 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 FAM120BQ96EK7 910 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 ZNF558Q96NG5 402 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 OSBPL11Q9BXB4 747 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CIPCQ9C0C6 399 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 NOL11Q9H8H0 719 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 GIMAP2Q9UG22 337 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 LZTS1Q9Y250 596 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 FFAR3O14843 346 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 GPR42O15529 346 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 FKBP9O95302 570 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CTPS1P17812 591 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 FGFR3P22607 806 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 PFKPQ01813 784 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 TECRLQ5HYJ1 363 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 FKBP9P1Q75LS8 142 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 TSPAN14Q8NG11 270 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 SLC39A3Q9BRY0 314 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 C17orf80Q9BSJ5 609 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 ETS2P15036 469 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 PTGER3P43115 390 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CPSF6Q16630 551 aaKnown RBP eCLIP6.35□□□□□ -1.39
SNX13-213ENST00000611725 DENND5AQ6IQ26 1287 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 TPGS1Q6ZTW0 290 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 LIMS2Q7Z4I7 341 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 HS6ST3Q8IZP7 471 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 RBFAQ8N0V3 343 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 PPP3R2Q96LZ3 170 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CACNA2D2Q9NY47 1150 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 GALPQ9UBC7 116 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ZFP37Q9Y6Q3 630 aaPredicted RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 TIPRLO75663 272 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ANXA5P08758 320 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 LINGO3P0C6S8 592 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 MAP4P27816 1152 aaKnown RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 RAD23AP54725 363 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 TRIM32Q13049 653 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 MAD2L1Q13257 205 aaPredicted RBP6.35□□□□□ -1.39
SNX13-213ENST00000611725 IKBKEQ14164 716 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 KDELC1Q6UW63 502 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 CBR4Q8N4T8 237 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ZNF461Q8TAF7 563 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 ARRDC2Q8TBH0 407 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 GATA6Q92908 595 aa6.35□□□□□ -1.39
SNX13-213ENST00000611725 OLFM1Q99784 485 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms