RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ATL1Q8WXF7 558 aa7.26□□□□□ -1.25
CSDE1-218ENST00000610726 DACT3Q96B18 629 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-218ENST00000610726 SIGLEC10Q96LC7 697 aa7.26□□□□□ -1.25
CSDE1-218ENST00000610726 SGIP1Q9BQI5 828 aa7.26□□□□□ -1.25
CSDE1-218ENST00000610726 MIR1-1HGQ9H1L0 117 aa7.26□□□□□ -1.25
CSDE1-218ENST00000610726 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-218ENST00000610726 SNX6Q9UNH7 406 aa7.26□□□□□ -1.25
CSDE1-218ENST00000610726 SPACA6W5XKT8 324 aa7.26□□□□□ -1.25
CSDE1-218ENST00000610726 C9JVG2 144 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 UBXN8O00124 270 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 COCHO43405 550 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 LRATO95237 230 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 COX7A2P14406 83 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SIRPB2Q5JXA9 342 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SAMD4BQ5PRF9 694 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SLC39A5Q6ZMH5 540 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 Q6ZVU0 165 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF786Q8N393 782 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF781Q8N8C0 355 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TRPV1Q8NER1 839 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 OR14C36Q8NHC7 312 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CYB5D2Q8WUJ1 264 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 DCAKDQ8WVC6 231 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CDKN2AIPNLQ96HQ2 116 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 FEM1CQ96JP0 617 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SYT11Q9BT88 431 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 AASDHPPTQ9NRN7 309 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TDP1Q9NUW8 608 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 IMP3Q9NV31 184 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TRBV23OR9-2A0A075B6M9 112 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 QSOX1O00391 747 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TOP3BO95985 862 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PRNPP04156 253 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SLC35G4P0C7Q5 338 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 POU1F1P28069 291 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 HSPA7P48741 367 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SLC20A2Q08357 652 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PRKG2Q13237 762 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 AP5B1Q2VPB7 878 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TIGD2Q4W5G0 525 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 C2orf27AQ580R0 203 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 WLSQ5T9L3 541 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ISLR2Q6UXK2 745 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 P3H2Q8IVL5 708 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ZDHHC14Q8IZN3 488 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CPA6Q8N4T0 437 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SIDT2Q8NBJ9 832 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SPPL2AQ8TCT8 520 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SEMA6AQ9H2E6 1030 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PCDHB1Q9Y5F3 818 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 HAS3O00219 553 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PITPNM1O00562 1244 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TEX28O15482 410 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SHOX2O60902 331 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 EIF2S1P05198 315 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ACADSP16219 412 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PIK3R1P27986 724 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SEC13P55735 322 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PSME3P61289 254 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 NCALDP61601 193 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 USP46P62068 366 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 SLC34A1Q06495 639 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TEAD2Q15562 447 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 MAPKAPK3Q16644 382 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PAGE2BQ5JRK9 111 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TTC33Q6PID6 262 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TXNDC11Q6PKC3 985 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PACS2Q86VP3 889 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CAND1Q86VP6 1230 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 COLGALT2Q8IYK4 626 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 OR6Y1Q8NGX8 325 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CLHC1Q8NHS4 586 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 AGAP11Q8TF27 550 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CCT7Q99832 543 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TRMOQ9BU70 441 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PCDH12Q9NPG4 1184 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TLR9Q9NR96 1032 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 KCTD5Q9NXV2 234 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 HCSTQ9UBK5 93 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 GGA2Q9UJY4 613 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 PSAT1Q9Y617 370 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 NRAPQ86VF7 1730 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 H0Y858 1186 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 H3BM21 787 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 NIPSNAP2O75323 286 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 MTX2O75431 263 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 AHSGP02765 367 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 FASP25445 335 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 MAT2AP31153 395 aaKnown RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 GKP32189 559 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 RPIAP49247 311 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 INPP1P49441 399 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ECT2LQ008S8 904 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 MBLAC2Q68D91 279 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 LYSMD3Q7Z3D4 306 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 HOMEZQ8IX15 550 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF513Q8N8E2 541 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-218ENST00000610726 BHLHE22Q8NFJ8 381 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms