RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CCR3P51677 355 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 PTPN5P54829 565 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 CACNG1Q06432 222 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 CTBP1Q13363 440 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 NFATC2Q13469 925 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 KRT71Q3SY84 523 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 FASTKD1Q53R41 847 aaKnown RBP11.09□□□□□ -0.63
CTCFL-214ENST00000608108 ZRANB3Q5FWF4 1079 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SEL1L3Q68CR1 1132 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 TBC1D3GQ6DHY5 549 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 TBC1D3CQ6IPX1 549 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 KIAA1161Q6NSJ0 714 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 MRNIPQ6NTE8 343 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 CYP2U1Q7Z449 544 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SNX20Q7Z614 316 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 CILP2Q8IUL8 1156 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 DENND6AQ8IWF6 608 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 LMNTD2Q8IXW0 634 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 NRSN1Q8IZ57 195 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 TBC1D3Q8IZP1 549 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SLC44A1Q8WWI5 657 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SCAMP4Q969E2 229 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 NUS1Q96E22 293 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 TPSD1Q9BZJ3 242 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 ROPN1BQ9BZX4 212 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-214ENST00000608108 BTBD1Q9H0C5 482 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 CDH19Q9H159 772 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 ACBD3Q9H3P7 528 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 FAM83DQ9H4H8 585 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 FAM96AQ9H5X1 160 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 PPCSQ9HAB8 311 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-214ENST00000608108 UGT1A7Q9HAW7 530 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 UGT1A10Q9HAW8 530 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 UGT1A8Q9HAW9 530 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SGK2Q9HBY8 427 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 PREBQ9HCU5 417 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 NSMCE4AQ9NXX6 385 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 MARCH4Q9P2E8 410 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-214ENST00000608108 TXNDC16Q9P2K2 825 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 NFKBIL1Q9UBC1 381 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 PSAT1Q9Y617 370 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 SLC30A1Q9Y6M5 507 aa11.09□□□□□ -0.63
CTCFL-214ENST00000608108 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.63
CTCFL-214ENST00000608108 A0A1W2PQU0 124 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 TLDC2A0PJX2 215 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 IGLON5A6NGN9 336 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 RNGTTO60942 597 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 ZNF217O75362 1048 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 TM7SF2O76062 418 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 OGNP20774 298 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 PXNP49023 591 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 RPS21P63220 83 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 MPP1Q00013 466 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 CREB5Q02930 508 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 CHRNA6Q15825 494 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 HENMT1Q5T8I9 393 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 PSAPL1Q6NUJ1 521 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 KIAA0408Q6ZU52 694 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 STRA8Q7Z7C7 330 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 LDB1Q86U70 411 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 SLC26A11Q86WA9 606 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 CAMKK1Q8N5S9 505 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 C2CD4AQ8NCU7 369 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 GPR150Q8NGU9 434 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 AP2M1Q96CW1 435 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 CPNE1Q99829 537 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 DHRS4Q9BTZ2 278 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 RIOK2Q9BVS4 552 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 SPATA16Q9BXB7 569 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 ASB8Q9H765 288 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 SPATA6Q9NWH7 488 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 PSMC3IPQ9P2W1 217 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 CRLS1Q9UJA2 301 aa11.08□□□□□ -0.64
CTCFL-214ENST00000608108 ZFR2Q9UPR6 939 aaKnown RBP11.08□□□□□ -0.64
CTCFL-214ENST00000608108 GOLGA6L10A6NI86 522 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 LRRC72A6NJI9 287 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 K7ESF4 209 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 AGPSO00116 658 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 CDH16O75309 829 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 FAM155BO75949 473 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 SEMA4FO95754 770 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 PMLP29590 882 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 GP5P40197 560 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 CDKN1CP49918 316 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-214ENST00000608108 PPP2CBP62714 309 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 PPP2CAP67775 309 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 ITGA9Q13797 1035 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 SEMA3AQ14563 771 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 TYSND1Q2T9J0 566 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 TMEM259Q4ZIN3 620 aa11.07□□□□□ -0.64
CTCFL-214ENST00000608108 SETMARQ53H47 684 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms