RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PRAMEF1O95521 474 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SLC4A1P02730 911 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 AHSGP02765 367 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SNRPAP09012 282 aaKnown RBP16.43■□□□□ 0.22
PMF1-206ENST00000606952 C6P13671 934 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SPRP35270 261 aaPredicted RBP16.43■□□□□ 0.22
PMF1-206ENST00000606952 MAGEA12P43365 314 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 POLD2P49005 469 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 LIG3P49916 1009 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 CSRP3P50461 194 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 ADARP55265 1226 aaKnown RBP16.43■□□□□ 0.22
PMF1-206ENST00000606952 SEMG2Q02383 582 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 DPTQ07507 201 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SIGLEC14Q08ET2 396 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 NFATC2Q13469 925 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 FASTKD1Q53R41 847 aaKnown RBP16.43■□□□□ 0.22
PMF1-206ENST00000606952 NEK5Q6P3R8 708 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 TRABD2AQ86V40 505 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 CYP4X1Q8N118 509 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SPEM1Q8N4L4 309 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 TRAM1L1Q8N609 369 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 GOLGA6L1Q8N7Z2 621 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 GPR22Q99680 433 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 PREBQ9HCU5 417 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 VPS9D1Q9Y2B5 631 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SLC30A1Q9Y6M5 507 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 TRPM6Q9BX84 2022 aa16.43■□□□□ 0.22
PMF1-206ENST00000606952 SMIM23A6NLE4 172 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 A8MX80 341 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 WNT9AO14904 365 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ITGA2BP08514 1039 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ITGALP20701 1170 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 CD151P48509 253 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 TTPAP49638 278 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 CLCN5P51795 746 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 MPP1Q00013 466 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 CTBP1Q13363 440 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ITGA9Q13797 1035 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ITIH4Q14624 930 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 TMED2Q15363 201 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 MAP7D1Q3KQU3 841 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 HSP90B2PQ58FF3 399 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 LYPLAL1Q5VWZ2 237 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 KIAA1161Q6NSJ0 714 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 PSAPL1Q6NUJ1 521 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.42■□□□□ 0.22
PMF1-206ENST00000606952 MICALCLQ6ZW33 695 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 SDCCAG8Q86SQ7 713 aaPredicted RBP16.42■□□□□ 0.22
PMF1-206ENST00000606952 PIANPQ8IYJ0 282 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 CXorf40AQ8TE69 158 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ASB12Q8WXK4 309 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.42■□□□□ 0.22
PMF1-206ENST00000606952 ULK4Q96C45 1275 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 VPS39Q96JC1 886 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 VPS35Q96QK1 796 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ZSCAN5AQ9BUG6 496 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 SLC6A17Q9H1V8 727 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 FAM83DQ9H4H8 585 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 ITM2CQ9NQX7 267 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.42■□□□□ 0.22
PMF1-206ENST00000606952 TXNDC16Q9P2K2 825 aa16.42■□□□□ 0.22
PMF1-206ENST00000606952 IGLV3-16A0A075B6K0 115 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 RNASEH2AO75792 299 aaKnown RBP16.41■□□□□ 0.22
PMF1-206ENST00000606952 RPS3P23396 243 aaKnown RBP eCLIP16.41■□□□□ 0.226e-6■■■□□ 17.9
PMF1-206ENST00000606952 TEAD1P28347 426 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 CCNFP41002 786 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 ETV3P41162 512 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 ADPRHP54922 357 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 CHRNA6Q15825 494 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 TMEM259Q4ZIN3 620 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 FAM151BQ6UXP7 276 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 RFLNAQ6ZTI6 216 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 SH2D5Q6ZV89 423 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 Q6ZVL8 140 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 ZNF398Q8TD17 642 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 LPGAT1Q92604 370 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 EDAQ92838 391 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 OMDQ99983 421 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 ABCG8Q9H221 673 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 NCKAP1Q9Y2A7 1128 aa16.41■□□□□ 0.22
PMF1-206ENST00000606952 TRIM49D1C9J1S8 452 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 PFDN6O15212 129 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 RECQL5O94762 991 aaPredicted RBP16.4■□□□□ 0.22
PMF1-206ENST00000606952 PYGLP06737 847 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 CD9P21926 228 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 ACRV1P26436 265 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 PPARGP37231 505 aaPredicted RBP16.4■□□□□ 0.22
PMF1-206ENST00000606952 ZKSCAN8Q15776 578 aaPredicted RBP16.4■□□□□ 0.22
PMF1-206ENST00000606952 DBN1Q16643 649 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 ZRANB3Q5FWF4 1079 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 ZNF789Q5FWF6 425 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 CWF19L1Q69YN2 538 aaKnown RBP16.4■□□□□ 0.22
PMF1-206ENST00000606952 EXOC3L1Q86VI1 746 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 NXPE1Q8N323 547 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 ACMSDQ8TDX5 336 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 ERLEC1Q96DZ1 483 aa16.4■□□□□ 0.22
PMF1-206ENST00000606952 MRRFQ96E11 262 aaKnown RBP16.4■□□□□ 0.22
PMF1-206ENST00000606952 WRAP53Q9BUR4 548 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms