RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SRCP12931 536 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 HOXA13P31271 388 aaPredicted RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 HOXC9P31274 260 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 ACTN2P35609 894 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 NAP1L1P55209 391 aaKnown RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 EGR4Q05215 589 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 KIF5AQ12840 1032 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZNF155Q12901 538 aaPredicted RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 AIMP2Q13155 320 aaKnown RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 MYBPHQ13203 477 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 CUL4AQ13619 759 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 NAB2Q15742 525 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 PCGF3Q3KNV8 242 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 NSUN5P2Q63ZY6 315 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 DUS1LQ6P1R4 473 aaKnown RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 RHBDF2Q6PJF5 856 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 SATL1Q86VE3 508 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZDHHC17Q8IUH5 632 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 DSELQ8IZU8 1212 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 PCDH20Q8N6Y1 951 aaKnown RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 OR8K5Q8NH50 307 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 TIGD1Q96MW7 591 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 FIZ1Q96SL8 496 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAD1Q99259 594 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZPBPQ9BS86 351 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 MMTAG2Q9BU76 263 aaKnown RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 PIGMQ9H3S5 423 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 PLK3Q9H4B4 646 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 SH2D4AQ9H788 454 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 PAG1Q9NWQ8 432 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 SUCLA2Q9P2R7 463 aaPredicted RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 OR14J1Q9UGF5 321 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 FBXO2Q9UK22 296 aaPredicted RBP3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 SNX9Q9Y5X1 595 aa3.88□□□□□ -1.79
RNU6-88P-201ENST00000606801 GREB1LQ9C091 1923 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 SMCHD1A6NHR9 2005 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZNF587BE7ETH6 402 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 K7ENM7 598 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 PAPSS1O43252 624 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 DAB1O75553 588 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAGE7O76087 117 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 KDM4BO94953 1096 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 AFPP02771 609 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 RB1P06400 928 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 PRSS2P07478 247 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAGE12FP0CL80 117 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAGE12GP0CL81 117 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAGE12IP0CL82 117 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 SELLP14151 372 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 ANXA7P20073 488 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 BDKRB2P30411 391 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 PIK3CAP42336 1068 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 CAMPP49913 170 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 CLNS1AP54105 237 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 DSCR9P59020 149 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 CSNK2A1P68400 391 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 MRPS34P82930 218 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAGE1Q13065 139 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 GAGE4Q13068 117 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 IKQ13123 557 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 FHL1Q13642 323 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 DECR1Q16698 335 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZNF805Q5CZA5 627 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 CACNA2D4Q7Z3S7 1137 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 SDCCAG8Q86SQ7 713 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 TICAM1Q8IUC6 712 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 RPAP2Q8IXW5 612 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 ACVR1CQ8NER5 493 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 CSNK2A3Q8NEV1 391 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 OR5R1Q8NH85 324 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 TRPC4APQ8TEL6 797 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 DUSP19Q8WTR2 217 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 ORAI1Q96D31 301 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 LYZL4Q96KX0 146 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 MARK4Q96L34 752 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 HARBI1Q96MB7 349 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 SEZ6LQ9BYH1 1024 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 MAGIXQ9H6Y5 334 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 PCDH9Q9HC56 1237 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 NSMCE4AQ9NXX6 385 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 TERF2IPQ9NYB0 399 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 WSB2Q9NYS7 404 aaPredicted RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 OGFRQ9NZT2 677 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 CWC15Q9P013 229 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 WNT16Q9UBV4 365 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 PCDHGB4Q9UN71 923 aa3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 PDS5AQ29RF7 1337 aaKnown RBP3.87□□□□□ -1.79
RNU6-88P-201ENST00000606801 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 FAM90A26D6RGX4 464 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 H3BQ06 376 aaPredicted RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 SLC28A2O43868 658 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 HS6ST1O60243 411 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 RFPL2O75678 378 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 TPPPO94811 219 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZBTB11O95625 1053 aaPredicted RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 LINC00271P0C7V0 271 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 SNHG28P0DPA3 235 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 FCGR1AP12314 374 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms