RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 EPB41L1Q9H4G0 881 aa17.73■□□□□ 0.43
SHKBP1-227ENST00000602011 RMI1Q9H9A7 625 aa17.73■□□□□ 0.43
SHKBP1-227ENST00000602011 PCDH18Q9HCL0 1135 aa17.73■□□□□ 0.43
SHKBP1-227ENST00000602011 VPS18Q9P253 973 aa17.73■□□□□ 0.43
SHKBP1-227ENST00000602011 LCMT1Q9UIC8 334 aa17.73■□□□□ 0.43
SHKBP1-227ENST00000602011 TUBD1Q9UJT1 453 aa17.73■□□□□ 0.43
SHKBP1-227ENST00000602011 A0A0J9YYE9 177 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 A0A1B0GTH6 734 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 TTC24A2A3L6 582 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 MYO1FO00160 1098 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 PPM1DO15297 605 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 SUV39H1O43463 412 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 TRBC1P01850 177 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 THRAP10827 490 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 PTSQ03393 145 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 ITKQ08881 620 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 KRT81Q14533 505 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 SMTNL2Q2TAL5 461 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 ALG1LQ6GMV1 187 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 WDR74Q6RFH5 385 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 GALNT13Q8IUC8 556 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 MAP7D3Q8IWC1 876 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 IL22RA1Q8N6P7 574 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 FAM71BQ8TC56 605 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 TSGA13Q96PP4 275 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 LYSMD1Q96S90 227 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 SLC38A3Q99624 504 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 NT5MQ9NPB1 228 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 ETNK2Q9NVF9 386 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 SLC39A1Q9NY26 324 aa17.72■□□□□ 0.43
SHKBP1-227ENST00000602011 OR5K4A6NMS3 321 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 TERTO14746 1132 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 MATN3O15232 486 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 DUX1O43812 170 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 MX2P20592 715 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 CCNCP24863 283 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 POLD2P49005 469 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 ZNF165P49910 485 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 MAXP61244 160 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 BORAQ6PGQ7 559 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 SFRP1Q8N474 314 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 HTR3CQ8WXA8 447 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 JPH3Q8WXH2 748 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 MAML1Q92585 1016 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 COX14Q96I36 57 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 SLC12A9Q9BXP2 914 aa17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 TRIT1Q9H3H1 467 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 SUDS3Q9H7L9 328 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 SARS2Q9NP81 518 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 UBR5O95071 2799 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-227ENST00000602011 ANKRD36A6QL64 1941 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 SOD1P00441 154 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 IL4RP24394 825 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 MAP4P27816 1152 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 UGT1A3P35503 534 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 GARSP41250 739 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 STC1P52823 247 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 GALNT2Q10471 571 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 NR1I3Q14994 352 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 PAFAH1B3Q15102 231 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 PDK2Q15119 407 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 IFI16Q16666 785 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 TSPAN33Q86UF1 283 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 RCBTB1Q8NDN9 531 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 ST14Q9Y5Y6 855 aa17.7■□□□□ 0.42
SHKBP1-227ENST00000602011 A0A1W2PQJ5 194 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 ZNF891A8MT65 544 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 PDHA1P08559 390 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 CTPS1P17812 591 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 NOP2P46087 812 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 EPHA4P54764 986 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 SLC25A11Q02978 314 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 ANO6Q4KMQ2 910 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 COLEC12Q5KU26 742 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 DOK6Q6PKX4 331 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 CEACAM20Q6UY09 585 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 SLC9B2Q86UD5 537 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 CACNA2D3Q8IZS8 1091 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 CCHCR1Q8TD31 782 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 ART4Q93070 314 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 KIAA1143Q96AT1 154 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 FBXO8Q9NRD0 319 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 RBM22Q9NW64 420 aaKnown RBP eCLIP17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 ANAPC7Q9UJX3 599 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 TMEM98Q9Y2Y6 226 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 B3GALT1Q9Y5Z6 326 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 DOPEY2Q9Y3R5 2298 aa17.69■□□□□ 0.42
SHKBP1-227ENST00000602011 KIR2DS5A0A0G2JLQ3 304 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 A0A0G2JNG1 304 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 GPR89AB7ZAQ6 455 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 KIR2DS3K7RE56 304 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 ASMTLO95671 621 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 SERPINC1P01008 464 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 SERPING1P05155 500 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 CYP1A2P05177 515 aa17.68■□□□□ 0.42
SHKBP1-227ENST00000602011 GPR89BP0CG08 455 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms