RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
VRK3-219ENST00000600137 OAS3Q9Y6K5 1087 aaKnown RBP13.67□□□□□ -0.22
VRK3-219ENST00000600137 DCHS1Q96JQ0 3298 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 AGAP14A8MT82 685 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 E7EVH7 732 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
VRK3-219ENST00000600137 CSF2P04141 144 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 MAGEA3P43357 314 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 TNNT3P45378 269 aaPredicted RBP13.66□□□□□ -0.22
VRK3-219ENST00000600137 GPR1P46091 355 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 MRPS25P82663 173 aaKnown RBP13.66□□□□□ -0.22
VRK3-219ENST00000600137 DR1Q01658 176 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 C2orf54Q08AI8 447 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 PEX6Q13608 980 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 POU6F1Q14863 301 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 ALG11Q2TAA5 492 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
VRK3-219ENST00000600137 RAET1GQ6H3X3 334 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 LRRC8BQ6P9F7 803 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 AGGF1Q8N302 714 aaeCLIP13.66□□□□□ -0.22
VRK3-219ENST00000600137 SLC25A45Q8N413 288 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 MCUQ8NE86 351 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 SAP25Q8TEE9 199 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 OR1E3Q8WZA6 343 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 ZNF592Q92610 1267 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 SCARF2Q96GP6 870 aaPredicted RBP13.66□□□□□ -0.22
VRK3-219ENST00000600137 RANBP9Q96S59 729 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 WDR26Q9H7D7 661 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 FGF22Q9HCT0 170 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
VRK3-219ENST00000600137 CNOT1A5YKK6 2376 aaKnown RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 C2orf81A6NN90 581 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 H7C0S8 307 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 STX7O15400 261 aaKnown RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 GPR39O43194 453 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 RAD51CO43502 376 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 PCDHGA12O60330 932 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 DFNA5O60443 496 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A9O60656 530 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 PPFIA2O75334 1257 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 AVILO75366 819 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 CER1O95813 267 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 SLC4A1P02730 911 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 NME1P15531 152 aaKnown RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A6P19224 532 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A1P22309 533 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A4P22310 534 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A3P35503 534 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A5P35504 534 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 POLD2P49005 469 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ARSDP51689 593 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 THOP1P52888 689 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 TERF1P54274 439 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ARHGAP8P85298 464 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ACVR1Q04771 509 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 DHX34Q14147 1143 aaKnown RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 CHRNA6Q15825 494 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ATP13A5Q4VNC0 1218 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 KHDC1Q4VXA5 237 aaKnown RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 CCDC38Q502W7 563 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ALS2CLQ60I27 953 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ENPP7Q6UWV6 458 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 PIP4P1Q86T03 277 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 PARGQ86W56 976 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 DNAAF3Q8N9W5 541 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 TSACCQ96A04 125 aaPredicted RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 WDR92Q96MX6 357 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 ZSCAN5AQ9BUG6 496 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A7Q9HAW7 530 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A10Q9HAW8 530 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 UGT1A8Q9HAW9 530 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 MRPL40Q9NQ50 206 aaKnown RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 TM7SF3Q9NS93 570 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 NLE1Q9NVX2 485 aaPredicted RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 UCKL1Q9NWZ5 548 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 PCDHGB2Q9Y5G2 931 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 PCYT1BQ9Y5K3 369 aaPredicted RBP13.65□□□□□ -0.22
VRK3-219ENST00000600137 ST14Q9Y5Y6 855 aa13.65□□□□□ -0.22
VRK3-219ENST00000600137 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
VRK3-219ENST00000600137 CCL22O00626 93 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 SLC30A4O14863 429 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 INPP4BO15327 924 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 PIAS2O75928 621 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 CRTAMO95727 393 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 PYGLP06737 847 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 DGKAP23743 735 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms