RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KCNF1Q9H3M0 494 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 TRABDQ9H4I3 376 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 RAD18Q9NS91 495 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 NCKIPSDQ9NZQ3 722 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 NFKBIL1Q9UBC1 381 aaPredicted RBP16.64■□□□□ 0.25
SSBP4-204ENST00000597724 CNOT6Q9ULM6 557 aaKnown RBP16.64■□□□□ 0.25
SSBP4-204ENST00000597724 SLC17A4Q9Y2C5 497 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 AAR2Q9Y312 384 aaKnown RBP16.64■□□□□ 0.25
SSBP4-204ENST00000597724 MSRB2Q9Y3D2 182 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 PTPRBP23467 1997 aa16.64■□□□□ 0.25
SSBP4-204ENST00000597724 FADS2P1A8MWK0 482 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 FGF1P05230 155 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 ADRA1AP35348 466 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 HMGCLP35914 325 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 DCDC1P59894 354 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 TCEA2Q15560 299 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
SSBP4-204ENST00000597724 PARP6Q2NL67 630 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 TMPRSS7Q7RTY8 843 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 TTC30BQ8N4P2 665 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 PTCD2Q8WV60 388 aaKnown RBP16.63■□□□□ 0.25
SSBP4-204ENST00000597724 SCARF2Q96GP6 870 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-204ENST00000597724 PPP1R2P1Q96PQ5 205 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 TMEM121Q9BTD3 319 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 FICDQ9BVA6 458 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 FRMD8P1Q9BZ68 369 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-204ENST00000597724 TMEM168Q9H0V1 697 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 CARS2Q9HA77 564 aaKnown RBP16.63■□□□□ 0.25
SSBP4-204ENST00000597724 HACD3Q9P035 362 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 DOLKQ9UPQ8 538 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 TMEM98Q9Y2Y6 226 aa16.63■□□□□ 0.25
SSBP4-204ENST00000597724 INPP4BO15327 924 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 LIASO43766 372 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 SLC4A1P02730 911 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 IVLP07476 585 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 BPIP17213 487 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 STIP1P31948 543 aaKnown RBP16.62■□□□□ 0.25
SSBP4-204ENST00000597724 GDF10P55107 478 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 ARHGEF18Q6ZSZ5 1173 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 TRIM74Q86UV6 250 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 SLC35F3Q8IY50 421 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 GALNT15Q8N3T1 639 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 C1orf54Q8WWF1 131 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 GLMNQ92990 594 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 RTP4Q96DX8 246 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 ZSCAN5AQ9BUG6 496 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 EVA1BQ9NVM1 165 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 TRNAU1APQ9NX07 287 aaKnown RBP16.62■□□□□ 0.25
SSBP4-204ENST00000597724 SUFUQ9UMX1 484 aa16.62■□□□□ 0.25
SSBP4-204ENST00000597724 ATP1A1P05023 1023 aaKnown RBP16.61■□□□□ 0.25
SSBP4-204ENST00000597724 GP1BAP07359 652 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 RPIAP49247 311 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 E2F1Q01094 437 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 OLIG2Q13516 323 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 SIX1Q15475 284 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-204ENST00000597724 ALS2CLQ60I27 953 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 PDPK2PQ6A1A2 396 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 DOK6Q6PKX4 331 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 CCNI2Q6ZMN8 369 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-204ENST00000597724 TAF8Q7Z7C8 310 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 TMPRSS12Q86WS5 348 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 NRROSQ86YC3 692 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 TRAM1L1Q8N609 369 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 CCL4L1Q8NHW4 92 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 BLOC1S5Q8TDH9 187 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 GPBAR1Q8TDU6 330 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 PLEKHG4BQ96PX9 1271 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 APOL2Q9BQE5 337 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 SPATA16Q9BXB7 569 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 BPIFA1Q9NP55 256 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 IL17CQ9P0M4 197 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 VPS18Q9P253 973 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 GPR34Q9UPC5 381 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 OAS3Q9Y6K5 1087 aaKnown RBP16.61■□□□□ 0.25
SSBP4-204ENST00000597724 KNTC1P50748 2209 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 ASXL3Q9C0F0 2248 aa16.61■□□□□ 0.25
SSBP4-204ENST00000597724 PLXNB3Q9ULL4 1909 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 SCN8AQ9UQD0 1980 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 EME2A4GXA9 379 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-204ENST00000597724 ZSCAN12O43309 604 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 METTL18O95568 372 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 ADCY8P40145 1251 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 GNPDA1P46926 289 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 NR0B2Q15466 257 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 CCNG2Q16589 344 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 KCTD11Q693B1 232 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 DENND5AQ6IQ26 1287 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 GUSBP11Q6P575 273 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 OGFOD3Q6PK18 319 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 GLT6D1Q7Z4J2 308 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 FAM46DQ8NEK8 389 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 GATA6Q92908 595 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 CNTNAP3BQ96NU0 1288 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 TBL1YQ9BQ87 522 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-204ENST00000597724 CNTNAP3Q9BZ76 1288 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 SUDS3Q9H7L9 328 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-204ENST00000597724 ARNT2Q9HBZ2 717 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 GULP1Q9UBP9 304 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms