RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 TSTD1Q8NFU3 115 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 OR14C36Q8NHC7 312 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 CLDN23Q96B33 292 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 ALKBH8Q96BT7 664 aaKnown RBP15.18■□□□□ 0.02
TRIM28-209ENST00000597423 ZBTB9Q96C00 473 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 SMC6Q96SB8 1091 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 ZSCAN5AQ9BUG6 496 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 SPATA16Q9BXB7 569 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 CCDC68Q9H2F9 335 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 PREBQ9HCU5 417 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 EURLQ9NYK6 297 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 CRLS1Q9UJA2 301 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 MTF2Q9Y483 593 aaPredicted RBP15.18■□□□□ 0.02
TRIM28-209ENST00000597423 COMMD10Q9Y6G5 202 aa15.18■□□□□ 0.02
TRIM28-209ENST00000597423 MUC22E2RYF6 1773 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-209ENST00000597423 A0A0U1RQS6 177 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 OR51F1A6NGY5 319 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TRIM49D1C9J1S8 452 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 PLK4O00444 970 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 UGT1A9O60656 530 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 MMP20O60882 483 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 FAM155BO75949 473 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TM7SF2O76062 418 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 ZNF7P17097 686 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-209ENST00000597423 OXTRP30559 389 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 FOXN2P32314 431 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 MAGOHP61326 146 aaKnown RBP15.17■□□□□ 0.02
TRIM28-209ENST00000597423 SMAD1Q15797 465 aaKnown RBP15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TYSND1Q2T9J0 566 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 SETMARQ53H47 684 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TNFAIP8L3Q5GJ75 292 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 AGBL4Q5VU57 503 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 KCTD16Q68DU8 428 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 KIAA1161Q6NSJ0 714 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TRIM67Q6ZTA4 783 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 Q6ZVL8 140 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 ZC3HC1Q86WB0 502 aaKnown RBP15.17■□□□□ 0.02
TRIM28-209ENST00000597423 CYP4X1Q8N118 509 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 SPEM1Q8N4L4 309 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 ARFGAP2Q8N6H7 521 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 GPR26Q8NDV2 337 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 ACMSDQ8TDX5 336 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TLCD1Q96CP7 247 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 AP2M1Q96CW1 435 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 TSPAN17Q96FV3 270 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 CABS1Q96KC9 395 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 COQ10AQ96MF6 247 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 FOXQ1Q9C009 403 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 UGT1A7Q9HAW7 530 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 UGT1A10Q9HAW8 530 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 UGT1A8Q9HAW9 530 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 SGK2Q9HBY8 427 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 CD248Q9HCU0 757 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 ITM2CQ9NQX7 267 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 OGFRQ9NZT2 677 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 CTNNAL1Q9UBT7 734 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 PSAT1Q9Y617 370 aa15.17■□□□□ 0.02
TRIM28-209ENST00000597423 XIRP2A4UGR9 3374 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3DA0A087WVF3 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3IA0A087WXS9 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3EA0A087X179 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3KA0A087X1G2 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3FA6NER0 549 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-209ENST00000597423 LRRC72A6NJI9 287 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3LB9A6J9 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 CFAP99D6REC4 459 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 PLRG1O43660 514 aaKnown RBP15.16■□□□□ 0.02
TRIM28-209ENST00000597423 ZNF217O75362 1048 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 RECQL5O94762 991 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-209ENST00000597423 HAUS5O94927 633 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 MPOP05164 745 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3HP0C7X1 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 RALBP11234 206 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 C6P13671 934 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 GABRG2P18507 467 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 NDUFV2P19404 249 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 CRABP2P29373 138 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TYK2P29597 1187 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 ETV3P41162 512 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 SERPINB8P50452 374 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 MPP1Q00013 466 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 POU4F1Q01851 419 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 DPTQ07507 201 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 FZD5Q13467 585 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 ITIH4Q14624 930 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3GQ6DHY5 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3CQ6IPX1 549 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 Q6ZS52 159 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 CCDC91Q7Z6B0 441 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TRABD2AQ86V40 505 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 SERPINA9Q86WD7 417 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 CACUL1Q86Y37 369 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 TBC1D3Q8IZP1 549 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-209ENST00000597423 RBFAQ8N0V3 343 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 KRT222Q8N1A0 295 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 FLCNQ8NFG4 579 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 PJA1Q8NG27 643 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 HMGB4Q8WW32 186 aa15.16■□□□□ 0.02
TRIM28-209ENST00000597423 FAM131CQ96AQ9 280 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms