RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 BPIP17213 487 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 LPOP22079 712 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 BLKP51451 505 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 ZDHHC20Q5W0Z9 365 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 RD3Q7Z3Z2 195 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 DNAAF3Q8N9W5 541 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 OR56A4Q8NGH8 313 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 OR52K1Q8NGK4 314 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 BRSK1Q8TDC3 778 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 SAP25Q8TEE9 199 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 BTN2A2Q8WVV5 523 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 TSACCQ96A04 125 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 SLC13A1Q9BZW2 595 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 DDX47Q9H0S4 455 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 SLC32A1Q9H598 525 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 PIH1D1Q9NWS0 290 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 IL17CQ9P0M4 197 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 APOBEC3BQ9UH17 382 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 ARL5AQ9Y689 179 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 PLXNB3Q9ULL4 1909 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 CNOT1A5YKK6 2376 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 TMEM202A6NGA9 273 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 TM4SF5O14894 197 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 SUN1O94901 812 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 ECEL1O95672 775 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 TPH1P17752 444 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 GRK6P43250 576 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 SRP54P61011 504 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 PDE1BQ01064 536 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 CDH17Q12864 832 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 GPS1Q13098 491 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 SEPT6Q14141 434 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 ALG11Q2TAA5 492 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 DOK6Q6PKX4 331 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 NYAP1Q6ZVC0 841 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 RBFAQ8N0V3 343 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 TRAM1L1Q8N609 369 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 DEFB124Q8NES8 71 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 RHBDD1Q8TEB9 315 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 HIC2Q96JB3 615 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 PLEKHG4BQ96PX9 1271 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 ZSCAN5AQ9BUG6 496 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 CAAP1Q9H8G2 361 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 EIF2B3Q9NR50 452 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 SPASTQ9UBP0 616 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 KLF15Q9UIH9 416 aa19.55■□□□□ 0.72
SHKBP1-214ENST00000597396 GOLGA4Q13439 2230 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 FADS2P1A8MWK0 482 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 TNFRSF10CO14798 259 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 PPFIA2O75334 1257 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 ASMTLO95671 621 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 TNFP01375 233 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 CTSEP14091 401 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 CSRP1P21291 193 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 DGKAP23743 735 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 SPAM1P38567 509 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 HK3P52790 923 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 TERF1P54274 439 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 POU6F1Q14863 301 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 PPP1R7Q15435 360 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 KCTD19Q17RG1 926 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 DBX2Q6ZNG2 339 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 PIP4P1Q86T03 277 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 TRIM74Q86UV6 250 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 OR4K2Q8NGD2 314 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 OR1E3Q8WZA6 343 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 PDXPQ96GD0 296 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 TCEAL2Q9H3H9 227 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 FGF22Q9HCT0 170 aa19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 PNMA8BQ9ULN7 279 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-214ENST00000597396 ACACBO00763 2458 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 PRSS38A1L453 326 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 NEMP2A6NFY4 417 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 CCDC188H7C350 402 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 NOVA1P51513 510 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 MSLNQ13421 630 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 PRRT3Q5FWE3 981 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 PDPK2PQ6A1A2 396 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 KLHL7Q8IXQ5 586 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 ZNF548Q8NEK5 533 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 LMX1AQ8TE12 382 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 RUNDC3BQ96NL0 473 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 CAMK1GQ96NX5 476 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 FRMD8Q9BZ67 464 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 SUDS3Q9H7L9 328 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 CYP4F12Q9HCS2 524 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 MRPL40Q9NQ50 206 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 UCKL1Q9NWZ5 548 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 BTBD3Q9Y2F9 522 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 KCTD3Q9Y597 815 aa19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 COL5A1P20908 1838 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-214ENST00000597396 ARHGEF17Q96PE2 2063 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 GLYATL1P3A0A0U1RQE8 302 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 SCAMP1O15126 338 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 FFAR2O15552 330 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 AQP9O43315 295 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 TPSB2P20231 275 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms